Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1414 ATGGCGTTTTCTATATACCCACTAGCGCCTTCAGCTACAACTACCCTCCACTTCTTTCTTCATCCAGGTTCAACCTTTTATCGTCAAGGTTTTTGCTCCGCTAGGAAGTTCGATGAACCATCCGGAAGTGAGCTCAAATTACTATTAAACAATGATTATTTCCGACGTACAATGCATGCTTTCTTCCGATGCTGCTGCAGTAAGTCTCATGCCAGTCCTGTCGCTGAAATGGGTGAGTTACTCTCAGATTTTTTTGTTTCAGGAATGCTCTTCTCTTTCTTTCAAGGAATGGGTCTGGGCTATGAGGAAACACAAATGCTGTTGGTCAATCACCCTGAGCTTGCAATGGTGTCTTTAAATTCATTGAGCGCTCGGGTTCGTTCTTTACAGTCTATTGGGTTTGATCGTCTTGCTCTGTTTAACTTGGTTACGAAGAGTCCAACTGTATTAACAGCTGAGGAAATTGACCCGTTGATCTGTTTTGTGCGAGATGAATTGGAAGGACAGCTAGAGCAAGCACAGATGAAACGCCTATTATCTGCTACAGAACCAAGATTTTTTGTGGGTTTTGATCTAAAAGTCAAACTGCTTCTCAACCGAGGAGTTCCCCGTGAAAAGATTGCCTATGTGCTCAACAATGTGAATTTGACAAAGGCACTGTGCCACAGGTCTGTGGATGAAATTGACAGAACTATAGCTTTCTTGAACCCCTTTGGTGGTATTAGTTTAATTGTAAGGCGCCCCGTAATTTTTAATTATGATTTGGATAATCAGCTGATTCCAAGAACCAATTTTTTGATTGAGCTTAGTGGAGGAGATGAGGATGCCACTGGGAAGGTGTTGCGTAAGCTCCCCACAATTTTGAGTTACCGTGTGGAGCATATGGAGAGCCACGTAGAGTTCCTGAGGTCTTTTGCAGGCTTGAGTGATCAAGAAATATTTCGGATAATACTGGTATTTCCTAGTATTATTAGTGCTAGCAGAGAGAGGAAACTGCGTCCTAGAATAGAGTTTCTCAAGGAATGTGGGTTGAATTCGGGTGATATCTTCAAGTTCTTGATAAAAGCTCCTTTGTTTCTGGGCCATTCATTTCATGAGAACATTGCATATAAACTTGTGTTTCTGGTCAAAATTGGGTATAAATTTAGGACAAAGGACTTGGCAATGGCAATTGGATCTACCACTAGGACAAGCTGTGAGAACTTGCAAAAGGTGATTGGTCTATTCTTGAATTATGGGTTTTCAAGCGAAGACATTGTTGCTATGAGCAAGAAGCATCCTCAGATACTGCAGTACAATCATACATCTTTAGAGAAGAAGATGAAGTACTTAATAGAGGAGATGGATCGCGATATTGAGGAGTTACTGGTTTTTCCTGCATTCCTTGGTTACAAGCTGGATGACAGAATTAAGCAAAGGTATGAAGTAAAGAGGAGTACGCGGGGGAAAGGATTGTCTCTCAATAAGCTTTTAACTATTTCAACTGAGAGATTCACTGGCAAACGAAAGAAGGCCTCTGCAGCGCATTCAATAGACATTATCAATGCAGGTGAAGGTTCATAA 1563 0.4139 MAFSIYPLAPSATTTLHFFLHPGSTFYRQGFCSARKFDEPSGSELKLLLNNDYFRRTMHAFFRCCCSKSHASPVAEMGELLSDFFVSGMLFSFFQGMGLGYEETQMLLVNHPELAMVSLNSLSARVRSLQSIGFDRLALFNLVTKSPTVLTAEEIDPLICFVRDELEGQLEQAQMKRLLSATEPRFFVGFDLKVKLLLNRGVPREKIAYVLNNVNLTKALCHRSVDEIDRTIAFLNPFGGISLIVRRPVIFNYDLDNQLIPRTNFLIELSGGDEDATGKVLRKLPTILSYRVEHMESHVEFLRSFAGLSDQEIFRIILVFPSIISASRERKLRPRIEFLKECGLNSGDIFKFLIKAPLFLGHSFHENIAYKLVFLVKIGYKFRTKDLAMAIGSTTRTSCENLQKVIGLFLNYGFSSEDIVAMSKKHPQILQYNHTSLEKKMKYLIEEMDRDIEELLVFPAFLGYKLDDRIKQRYEVKRSTRGKGLSLNKLLTISTERFTGKRKKASAAHSIDIINAGEGS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1414 520 Pfam mTERF 332 498 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 Pfam mTERF 92 341 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 FunFam - 64 270 - -
Glsi10g1414 520 PANTHER CGI-12 PROTEIN-RELATED 91 269 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 Gene3D Transcription termination factor 3, mitochondrial 88 271 IPR038538 -
Glsi10g1414 520 Gene3D Transcription termination factor 3, mitochondrial 306 508 IPR038538 -
Glsi10g1414 520 SMART mt_12 350 381 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 SMART mt_12 452 483 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 SMART mt_12 314 345 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 SMART mt_12 105 135 IPR003690 GO:0003690|GO:0006355
Glsi10g1414 520 SMART mt_12 420 451 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1414 Glsi-ChrGlsi10 9563446 9565083 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi10g1414 mTERF 1.9e-20 No_clan