Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1410 ATGGAAGAGGAGGAGACGGTCTTCTGTCGGTGCCACAAGAGCCTTTCTAGTCGCATTGCTATTGAAGGTGCTGCAATGGCTGCCAGCGAGTTGGCCTGTACATACGCTGCCTTGATACTCTACGATGATGGAATCCCAATCACCGCGGAGAAGATTAGTAAAGTGGTTAAAGCCGCGAATGTGACTGTGGAATCGTACTGGCCGAGCCTATTTGCGAAACTTGCGGAGAAGAGGAACATTGAGGATCTCGTTTTGAATGCTGGTTCAGGCGGTGGTGGTGCTGTAGCTGTTGCTGCTCCTGCTGCTGGTGCCGCTGGTGGTGGTGGTGGTGGTGGTGGTGCCGCTGCAGCGCCTGCCGCCGAGGAAAAGAAGGAAGAACCCAAGGAAGAGAGTGATGATGACATGGGGTTCAGCTTATTTGATTAG 426 0.5329 MEEEETVFCRCHKSLSSRIAIEGAAMAASELACTYAALILYDDGIPITAEKISKVVKAANVTVESYWPSLFAKLAEKRNIEDLVLNAGSGGGGAVAVAAPAAGAAGGGGGGGGAAAAPAAEEKKEEPKEESDDDMGFSLFD 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1410 141 CDD Ribosomal_P1 30 86 - -
Glsi10g1410 141 Pfam 60s Acidic ribosomal protein 47 140 - -
Glsi10g1410 141 MobiDBLite consensus disorder prediction 105 141 - -
Glsi10g1410 141 Gene3D - 26 88 IPR038716 -
Glsi10g1410 141 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 26 141 - -
Glsi10g1410 141 Hamap 50S ribosomal protein L12 [rpl12]. 31 141 IPR027534 GO:0003735|GO:0005840|GO:0006414
Glsi10g1410 141 FunFam 60S acidic ribosomal protein P1 26 88 - -
Glsi10g1410 141 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1410 Glsi-ChrGlsi10 9519043 9521729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1410 26 141 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 60.504 2.69e-41 132