Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1395 ATGCACAATCTGCAGCTTCCCATTCCCAACTTTTTTCTCATGATATTACACCATCTTCCATTGCTCCTTTTGTACTTCCCATTTCATTTTCATGGCATCCTCTGTAACGTCTCCAGTCTTAACAAGGACACTGACAGAGATGCTCTTCTTTCATTCAAATCCCATGTTACTGACCCTAAGAATGCTCTATCTGGGTGGACTTCTAATTCCTCTCACTGCACCTGGTATGGCGTCTCCTGCTCCAAAGTTGGAAGCAGAGTCCAATCTCTCAGCCTACGCGGACTTGGCCTCTCTGGTGAACTCCCGTCTCACCTCTCCAACCTTACTTACCTACATTCACTTGACCTTTCCAACAATGCATTCCGGGGCCAAATTCCCTTGGAGTTTTCCCGTCTCTCCCTCCTCAATGAGATTGCATTAGCTTCCAATGATCTCGATGGTACCCTTCCCGCACAGTTAACCCATCTTCACCAACTCCATATTTTAGATTTCTCTGCCAATAATCTCACTGGTGAAATCCCTCCAGAATTTGGAAACCTCTCCTCTCTCACTAATCTTTCCTTGGCAAGGAACCGGCTTTCTGGGGAAATCCCCGGTGAATTGGGCAATCTCCGCAATCTTTCCTATCTTCAGCTCTCTGAGAACTATTTATCTGGCGAGTTTCCCATTTCCATCTTCAACATCTCTTCGTTAGTCTTCTTGTCTGTAACAAAGAATCGCCTTTCTGGAAAATTACCACAATATATTGGTCAAGCTCTTCCAAATCTCAGGAGCCTCTATCTGGCAAACAACAGGTTTTGGGGTGTAATTCCCAGTTCTATATCCAATGCTTCACGTCTCGAATTTTTGGATCTCTCCCACAATCAATTTCATGGGTTTGTTCCTCTGTTCAGAAACATGTACAATCTTACCCAGCTAATTCTTGGTGATAACTATATCTCCTCTACAACATCACTGAATTCTGAGCTTTTTGATTCCCTTAGAAACTGTACGAAGCTGAAAATTCTGATGATCCAGTCCAATCAGCTAGCAGGAGAACTTCCAAAATCTGTTGCAAATCTTTCAACCAATCTCGAACAATTTTGTGTATCCAATAACTCATTTACGGGAAGAATCCCTCAAGGAATGGGAAAATTTCAAAATCTTGTGTCCTTGTCTTTTGAAATGAATCATTTTAGAGGTGAGATACCATTAGAAATAGGAGCGCTGAATAAACTGGTGCGACTTCTAGTATACGAAAACAGTTTGTCAGGAGAAATTCCAGACATCTTTGGCAATTTCACAGAACTCTCTATCCTTGCAATGGGTTTTAACAAGCTCTCTGGTAGAATTCCCTCTAGCATTGGACAGTGCAAGCGATTGAATTTTTTGGACCTTCAAAAGAATAATCTTCATGGGACCATATCAGAGGAGATTTTTAGGCTTTCTGGCCTAACCACCCTGTCCTTGTCAGGCAACGCCCTATATGGTTCGCTGCCCTCTGAACTCAACTCCATGGAGCAACTTCAGATCGTGGACATCTCTGACAACCATCTATCAGGATATATTCCTGAGGAAATAGATGGCTGCGCAAGCTTGCAGTCTCTTGTATTCGCAAGAAACAACTTCAGTGGCTCAATTCCAAGTACCATGGGGAATTTAACATCGTTGGAGACTTTGGATTTATCTTCAAACAACCTCTCTGGTTCGATTCCTGCAACTTTAGAGAAGCTCCAGTATATGGTGAAATTAAATTTTTCATTCAACCATTTAGAAGGGGAAGTTCCTACTAAAGGTGTTTTTATGAACCTCAGCGAAGTTGCTCTCCTAGGAAACAAGAATCTCTGCAGTCATAACAAGGAAATTGCAGAAAAGCTGGAAATCATTCTCTGTGTCCCTGCTAAAAAGAACAGAGTTCCGACCATTCTTGCAGTTACAGGTGCCACTGTTCTATTCATATCGATGTTCTGCCTAGGGTGGGCATTGATTTCCCGAATGAAGAAAAACAAGGGGGAGAGAAAGAGTTTATCATCTGCTCGTCTCAAGGGACTGCCTCAAAATATATCCTATGCTGATATTCGAGCTGCTACAAACAATTTTGCATCTGAAAACTTGATAGGGAAGGGTAGCTTTGGCTTTGTTTATAAGGGTGTGTTCAGAACCAGCCCAGGTGAAACTACCCTTGCCGTGAAAGTCCTGGACTTGGAACAAAGCGAAGCTTCTCGGAGTTTCAATGCAGAGTGTGAAGCTCTGAAAAATGTCAGGCATAGGAACCTTGTGAAGCTCATCACTTCTTGCTGTAGCATTGATCATAAAGGTGATGATTTTAAGGCCCTAATTATGCAATTCATGTCCAACGGTAATTTGGACATGTGGCTGTACCCAATAGTCGAAGAATACTCTTTGAACTTTTCGCAGAGACTGAACATTGCCATAGACATTGCTAGCGCTATGGACTATCTGCACTATGACTGTGACCCAGCAGTAGTCCATTGCGATTTGAAACCAGGTAATGTCTTATTAGATGAAAATATGGTTGCCCATGTTGGAGATTTTGGATTAGCAAGGCTTCTTTCTCAAAATTCATCGGAGACTACCACTGTCGGACTGAAGGAATATGGTCAAGGTGGCAAAGCTTCAACATTTGGGGATGTCTACAGTTTTGGGATTTTACTGCTTGAGATGTTCATAGCAAAAAAGCCAACTGACAAGATGTTCAAGGAAGGTTTAAGCCTTAACAAATTTGCCTCGGCCATGGATGAGAATCAAATACTGAAGGTTGCTGATCCAAACCTTTTTAACGATTTTGAATGTTCTTTACAAAGCTCAAGCACTGGTTATCCTAGTGATGGCAATAGTAGTGACAGCAATAATTATAGTAACACGCGCTGCCCGCGCAAAACAGAGGAGTATATAGCTGCTGTTATAAAAGTGGGCTTGTGTTGTGCAGCTGAATTGGCCAAAGATCGCTTGACCATGAGAGAGGCCTCAAAAAAATTGCAAGGAATTAGAGAGGCTTTTCTGGCTTTATGA 3012 0.4226 MHNLQLPIPNFFLMILHHLPLLLLYFPFHFHGILCNVSSLNKDTDRDALLSFKSHVTDPKNALSGWTSNSSHCTWYGVSCSKVGSRVQSLSLRGLGLSGELPSHLSNLTYLHSLDLSNNAFRGQIPLEFSRLSLLNEIALASNDLDGTLPAQLTHLHQLHILDFSANNLTGEIPPEFGNLSSLTNLSLARNRLSGEIPGELGNLRNLSYLQLSENYLSGEFPISIFNISSLVFLSVTKNRLSGKLPQYIGQALPNLRSLYLANNRFWGVIPSSISNASRLEFLDLSHNQFHGFVPLFRNMYNLTQLILGDNYISSTTSLNSELFDSLRNCTKLKILMIQSNQLAGELPKSVANLSTNLEQFCVSNNSFTGRIPQGMGKFQNLVSLSFEMNHFRGEIPLEIGALNKLVRLLVYENSLSGEIPDIFGNFTELSILAMGFNKLSGRIPSSIGQCKRLNFLDLQKNNLHGTISEEIFRLSGLTTLSLSGNALYGSLPSELNSMEQLQIVDISDNHLSGYIPEEIDGCASLQSLVFARNNFSGSIPSTMGNLTSLETLDLSSNNLSGSIPATLEKLQYMVKLNFSFNHLEGEVPTKGVFMNLSEVALLGNKNLCSHNKEIAEKLEIILCVPAKKNRVPTILAVTGATVLFISMFCLGWALISRMKKNKGERKSLSSARLKGLPQNISYADIRAATNNFASENLIGKGSFGFVYKGVFRTSPGETTLAVKVLDLEQSEASRSFNAECEALKNVRHRNLVKLITSCCSIDHKGDDFKALIMQFMSNGNLDMWLYPIVEEYSLNFSQRLNIAIDIASAMDYLHYDCDPAVVHCDLKPGNVLLDENMVAHVGDFGLARLLSQNSSETTTVGLKEYGQGGKASTFGDVYSFGILLLEMFIAKKPTDKMFKEGLSLNKFASAMDENQILKVADPNLFNDFECSLQSSSTGYPSDGNSSDSNNYSNTRCPRKTEEYIAAVIKVGLCCAAELAKDRLTMREASKKLQGIREAFLAL 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1395 1003 SMART LRR_typ_2 547 571 IPR003591 -
Glsi10g1395 1003 SMART LRR_typ_2 180 204 IPR003591 -
Glsi10g1395 1003 SMART LRR_typ_2 156 179 IPR003591 -
Glsi10g1395 1003 SMART LRR_typ_2 475 499 IPR003591 -
Glsi10g1395 1003 SMART LRR_typ_2 253 277 IPR003591 -
Glsi10g1395 1003 SMART LRR_typ_2 427 451 IPR003591 -
Glsi10g1395 1003 SMART LRR_typ_2 108 132 IPR003591 -
Glsi10g1395 1003 SMART LRR_typ_2 300 326 IPR003591 -
Glsi10g1395 1003 Gene3D Ribonuclease Inhibitor 199 297 IPR032675 -
Glsi10g1395 1003 Gene3D Ribonuclease Inhibitor 298 618 IPR032675 -
Glsi10g1395 1003 PANTHER OS04G0122200 PROTEIN 202 996 - -
Glsi10g1395 1003 ProSiteProfiles Leucine-rich repeat profile. 549 572 IPR001611 GO:0005515
Glsi10g1395 1003 FunFam LRR receptor-like serine/threonine-protein kinase EFR 319 629 - -
Glsi10g1395 1003 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 777 1003 - -
Glsi10g1395 1003 ProSitePatterns Protein kinases ATP-binding region signature. 699 724 IPR017441 GO:0005524
Glsi10g1395 1003 PRINTS Leucine-rich repeat signature 280 293 - -
Glsi10g1395 1003 PRINTS Leucine-rich repeat signature 547 560 - -
Glsi10g1395 1003 Pfam Leucine Rich Repeat 549 571 IPR001611 GO:0005515
Glsi10g1395 1003 Gene3D Phosphorylase Kinase; domain 1 653 774 - -
Glsi10g1395 1003 Gene3D Ribonuclease Inhibitor 41 198 IPR032675 -
Glsi10g1395 1003 Pfam Leucine rich repeat N-terminal domain 43 81 IPR013210 -
Glsi10g1395 1003 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 42 201 - -
Glsi10g1395 1003 Gene3D Transferase(Phosphotransferase) domain 1 777 1000 - -
Glsi10g1395 1003 ProSiteProfiles Protein kinase domain profile. 693 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1395 1003 SUPERFAMILY L domain-like 356 611 - -
Glsi10g1395 1003 SUPERFAMILY L domain-like 44 315 - -
Glsi10g1395 1003 SMART serkin_6 693 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1395 1003 FunFam Leucine-rich repeat receptor protein kinase EMS1 221 318 - -
Glsi10g1395 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Glsi10g1395 1003 Pfam Protein tyrosine and serine/threonine kinase 696 901 IPR001245 GO:0004672|GO:0006468
Glsi10g1395 1003 SUPERFAMILY Protein kinase-like (PK-like) 670 993 IPR011009 -
Glsi10g1395 1003 Pfam Leucine rich repeat 254 313 IPR001611 GO:0005515
Glsi10g1395 1003 FunFam LRR receptor-like serine/threonine-protein kinase EFR 664 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1395 Glsi-ChrGlsi10 9436749 9439926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1395 33 1000 Receptor kinase-like Gene Family AT3G47570 39.241 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi10g1395 PK_Tyr_Ser-Thr 4.6e-34 CL0016