Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1393 ATGTCTGTGACTCATCATATAAACGATGTTGTTAGCGGTGATTCTGCTTCTGCTGCTGCTGCTATTCATAGTGGGGGTGCTGCTGTAAGACCTTTGCAGCCTTTTGACATTTCCACCTCTACTTCTTCTAACACCACTCGCCCTGCCTTCAAATCCCCAGGGGCGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAATGCACAATGGAAGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTGCTGTTCCTGTTCCTCCTGATCTTCTTATCCCCACTTCAGTCACGGCTGCTTCTCGGTCTCCCTTGGATAGTGGTTTCAATCTAAGGTTGTCGAGCAGTACTGATCTGGAGCCAGGTAGGTGCAGGAGAACGGATGGGAAAAAATGGAGATGTTCTAGAGATGTGGCTCCAAATCACAAGTATTGTGAGCGTCATATGCACAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAAGGTAATGCCAACAGCAGCAACAGTGGCTGCAACGACAATGAGCAAATCAAGAGGGCTCGCCATGATTATCATCCTTTTCCTACCTCTGAGATGACTGTGGCTGTTTCTAATCCCACAATCCGAAGTGGTGGATCTTCATCTCAGTTTCTCCCGTCTACTACCAGTCAGACATACCACGAATCTTCCCTTTCTCTTGAGAAGTTTGGTGTCAAAGCTGCTAATTTTGACTCCGTGGGTTCTGTGCCATCGGATAACGAACCCAGGGGCTTGGACTGGATGCTGAAGGGAGACCCCATTTCCATGGCTGCTGCTTCTGCTCCAGAATGGCAGTCTCTGATGCAGAACGAAGTTGGATTGACCAACCAGAGTTCCTGTAACAACAATGTCCAAATTTCCAGTTCAAATTACGAAGAGACTCTTTATCTGAATTCATATGCGTCTTTCAATTCTGGACTAGATCAACAGAACAGACGGTGCCCTCTGTTCCTCAATCCTCTTATTATTCCTGTGGAAAATTCTCAGCCCGAAAAACCCAGGGGTTTCATTGATGCTTGGTCTAATGCAGAAACAGGGGAAAACAATGCCAACGCCAACAAGAGCCCTGTTGCGTCAAGCGGTAAATTATCTCTTTCTTTTCTTGATCTATCAATGGGTGGTGGTGGTGGTTCTGTGGATGAAGACATGGGTGTAGGCTTTATGGAGCCTGAAGGAAACACAGGAGATGGTACTAAAACCCATCTTGCAAATTGGCTCGCTCCTGCACCTTGGGTAGCTTCAACACCTGGGGGTCCCCTAGCTGAAGTTCTAAGACCAAGCACGGTGGCTGCCACCAACGAGGCAGCGTCCAATCCATCCTCTCCGGTCATAACAAATGCTGAATCCGGCAGTCCACTAGGAACAATGGTGTCATCTCCATCTGGCGTTTTGCAGAAAACGCTTGCTTCGTTGTCTGATAGTAGTAGCAATAGCAGCCCAACGGTTGCATCTTCAAGGGCCAATTCTGAGATTGCCTTGCTCTGGTTTAATCAAAAAGCAAATTAG 1527 0.4774 MSVTHHINDVVSGDSASAAAAIHSGGAAVRPLQPFDISTSTSSNTTRPAFKSPGAMAASLGFPFTNAQWKELERQAMIYKYMMAAVPVPPDLLIPTSVTAASRSPLDSGFNLRLSSSTDLEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEGNANSSNSGCNDNEQIKRARHDYHPFPTSEMTVAVSNPTIRSGGSSSQFLPSTTSQTYHESSLSLEKFGVKAANFDSVGSVPSDNEPRGLDWMLKGDPISMAAASAPEWQSLMQNEVGLTNQSSCNNNVQISSSNYEETLYLNSYASFNSGLDQQNRRCPLFLNPLIIPVENSQPEKPRGFIDAWSNAETGENNANANKSPVASSGKLSLSFLDLSMGGGGGSVDEDMGVGFMEPEGNTGDGTKTHLANWLAPAPWVASTPGGPLAEVLRPSTVAATNEAASNPSSPVITNAESGSPLGTMVSSPSGVLQKTLASLSDSSSNSSPTVASSRANSEIALLWFNQKAN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1393 508 Pfam QLQ 63 95 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi10g1393 508 ProSiteProfiles QLQ domain profile. 63 98 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi10g1393 508 Pfam WRC 121 162 IPR014977 -
Glsi10g1393 508 SMART QLQ_2 62 98 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi10g1393 508 ProSiteProfiles WRC domain profile. 119 163 IPR014977 -
Glsi10g1393 508 MobiDBLite consensus disorder prediction 439 463 - -
Glsi10g1393 508 PANTHER GROWTH-REGULATING FACTOR 5 42 374 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi10g1393 508 MobiDBLite consensus disorder prediction 151 176 - -
Glsi10g1393 508 MobiDBLite consensus disorder prediction 161 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1393 Glsi-ChrGlsi10 9428970 9431347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1393 24 431 GRF Transcription Factor Family AT4G24150 32.867 8.09e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Glsi10g1393 WRC 1.1e-20 No_clan