Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1349 ATGCCCTATTGCGACGTTGGGACTCATCAAGCAGCCGACGACGCTTGCCTTAACAATGAGATTAAGATATTTTATAGAACTTACGGTCATGGACCCACTAAAGTCCTCCTCATCATAGGATTGGCTGGGACACATGACTCTTGGGGCCCACAAATCAAGGGGCTGACGGGAACCGTCTTGCCCAACGATGATGATTCCGACAACGCTGATTGGAATTCAGCTGACCACCGGTGCGGAGATGACAATGAGAGTGGTGGTGGTATCGAGGTCTGCGCATTCGATAACCGTGGCATGGGTCGGAGCTCCGTACCCACCAAAAAGTCTGCCTATACAACAAAGATCATGGCAAAGGATGCAGTTGCTTTATTAGATCATTTAGGATGGAAAAAAGCTCACGTTTTTGGGCATTCAATGGGAGCCATGATAGCATGTAAACTAGCAGCATTGGTGCCTGATAGAGTTCTCTCGTTGGCATTGCTCAATGTAACGGGTGGAGGTTTAGAATGCTTTCCAAAGCTTAATCGACAAACCTTCTCCATTGCTTACCGTTTCTTGAGAGCAAAGACTCCTGAACAAAGGGCTGCTGTTGACTTGGACACCCACTACTCTAAGGAATATCTTGAGGAATATGTTGGAACTGATAAGAGGAGAACGATCTTATATCAGCAATATGTGAAAGGTATATCAGCAACTGGGATGCAATCAAATTATGGTTTTGATGGCCAAGTCAATGCCTGCTGGACGCATAAAATGATTCGATCAGAGATAGAGTTGATTAAATCTGCTGGTTTTCTTGTTTCAGTCATACATGGCAGGCATGATGTAATTGCTCAGATATACTACGCAAAACGACTTGCAGAGAGGCTGCATCCGATGGCTAGAATGGTAGATCTTTATGGAGGTCATTTAGTAAGTCATGAGAGGACTGAAGAGGTCAATCAGGCTCTTTTTGACTTGATCAAGGCATCAGAAGTGAAGATGAGCCCACAAGATTGGACTAATTTGCCCAAGAAAACTACTTGGTGGACAGAGAAAAGGGCGTTAATATATAGAACAAACATTCAGGGTGGAAGCATGTCGTTGGCATGTTGCCTAATAGAAAAACTGCATCTCTGCCTATTATATCTTTTTGGTCTCCTCCTTCTGGCATTTGAGTACGGGAGAAAGCATCTAAGAAGTATTAAGTCAGTTCGAGTCGCAACTTCCCACTCGTAG 1215 0.4436 MPYCDVGTHQAADDACLNNEIKIFYRTYGHGPTKVLLIIGLAGTHDSWGPQIKGLTGTVLPNDDDSDNADWNSADHRCGDDNESGGGIEVCAFDNRGMGRSSVPTKKSAYTTKIMAKDAVALLDHLGWKKAHVFGHSMGAMIACKLAALVPDRVLSLALLNVTGGGLECFPKLNRQTFSIAYRFLRAKTPEQRAAVDLDTHYSKEYLEEYVGTDKRRTILYQQYVKGISATGMQSNYGFDGQVNACWTHKMIRSEIELIKSAGFLVSVIHGRHDVIAQIYYAKRLAERLHPMARMVDLYGGHLVSHERTEEVNQALFDLIKASEVKMSPQDWTNLPKKTTWWTEKRALIYRTNIQGGSMSLACCLIEKLHLCLLYLFGLLLLAFEYGRKHLRSIKSVRVATSHS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1349 404 Gene3D alpha/beta hydrolase 17 322 IPR029058 -
Glsi10g1349 404 SUPERFAMILY alpha/beta-Hydrolases 19 318 IPR029058 -
Glsi10g1349 404 PRINTS Epoxide hydrolase signature 133 146 IPR000639 GO:0003824
Glsi10g1349 404 PRINTS Epoxide hydrolase signature 297 319 IPR000639 GO:0003824
Glsi10g1349 404 PRINTS Epoxide hydrolase signature 147 160 IPR000639 GO:0003824
Glsi10g1349 404 PRINTS Epoxide hydrolase signature 87 102 IPR000639 GO:0003824
Glsi10g1349 404 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN 17 322 - -
Glsi10g1349 404 Pfam alpha/beta hydrolase fold 82 162 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1349 Glsi-ChrGlsi10 9159176 9163447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1349 71 162 Acyl Lipid Metabolism Gene Families AT3G51000 40.860 1.32e-08 54.3