Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1346 ATGGCCTCAACTGGTTATACCCTCTGGAACAACCAGAAAAGTAAGCATGGTGACCAATTTCATTTGGAGCTTTACTGTTGCTTTCTCACTTCTATTCTCAAGGGAAACCCACTAATGATGGAGCTTTCACCATTGGAGGGTTTATTTGACTTGGATTTGGTCCCATTGCCACACCAAAGCAATCAAATTTGCTTCAATCAGTTCCCAGAGCTCGAAAATTTCAACTGTGACTTAGAGTCTTTTGAACATAATTTTCCTCCTCTTTATGAAGATTTTGTGATCGACCAAAAGCCGCTGAGTATTAACATGCCTCCACTCGCTCAGTGTGAGAGTTTTTTATGGGGCTTTGGCGAAGCCTCGATGATGATTGGAAGTGGGTTTGAGACTTCTGTGAAAGAAGAGGAGGAGAATAAGAAAAACACACAGAGGACTTGTATTAGGAATACGAGGTCAACCTCGTTGGAATTTGATGAGATAAGGAAGCATTTTGATGTTCCAATAACAAAAGCAGCAAAAGAAATGAATGTGGGATTGACCCTCTTGAAGAGAAGGTGCAGAGAGCTGAACATCACAAGGTGGCCCCACAGGAAAATCAAGAGCTTGAAGTCCCTCATCAACAATGTCAAGGAACTGGGCTTGACAAACGAGTTGACTATGCTGGAGAAGCACAAGAGGCTAGTAGAGAAATTACCGGATATGGAACTGACTGAGAAAACCAAGAAGCTGAGGCAAGCTTGTTTCAAAGCTAATTACAAGAGAAGAAGATCATTGACTCTTCAAGCTTGA 786 0.4198 MASTGYTLWNNQKSKHGDQFHLELYCCFLTSILKGNPLMMELSPLEGLFDLDLVPLPHQSNQICFNQFPELENFNCDLESFEHNFPPLYEDFVIDQKPLSINMPPLAQCESFLWGFGEASMMIGSGFETSVKEEEENKKNTQRTCIRNTRSTSLEFDEIRKHFDVPITKAAKEMNVGLTLLKRRCRELNITRWPHRKIKSLKSLINNVKELGLTNELTMLEKHKRLVEKLPDMELTEKTKKLRQACFKANYKRRRSLTLQA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1346 261 ProSiteProfiles RWP-RK domain profile. 136 222 IPR003035 -
Glsi10g1346 261 PANTHER PROTEIN RKD4 127 259 IPR044607 GO:0003700
Glsi10g1346 261 Pfam RWP-RK domain 154 201 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1346 Glsi-ChrGlsi10 9143990 9145240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1346 154 257 AtRKD Transcription Factor Family AT5G53040 66.346 9.85e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Glsi10g1346 RWP-RK 6.2e-22 No_clan