Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1322 ATGTATGCAGAGACTGGTCTCCTGTTCCCATATTTCCAGAATTTCTCTCAAGAACTTCAACAACTTGAGGAGTACTGCAAAACCCAGAAGTCCATTGCTTCAATGAGCGACTTCATCCAGTCTGCTGCCTTATCAGAGTATGATTTGGCAGCAGAGGGGGATCTGTTCAAGGCTCCTGAACCTATTATTGAAGAACCAGTCATGGACCTGGATCCCATGGCAGCAGCCATCTCAATGATATCTTGTGGGGAAGATGTTGTATCCCCACAGGGACTAAAACCCACAGATATGGATGCTCTTCAAACTGAGCAGCTACTGAGTGAGGTATTCTATGAATGCAAAAAGGATATCCTAGAAAAGGCCGCAATAGAGTCACCACTCTGTGAGATTCTGGATATCAAGGTTCCTATTCTGAATACTGATGAAAACCAAATTCAAGAAAATAAACTAATTCCTGACATGCCATTACCAAAAAGTGTCAGTTCAGGTTTTTTGAGCTCAATGGATTGGATGCAAGGAGCCGCAATCAAACCTACTTTTCTTGATTTCCCGGGAATAGATTTCAATGAAGTTTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTTGGTAATGGTAATGTGAGCCTCATTGAATCTCCTCTTGAGAGGCCCTTTCTTATCAGCAACTGCACCAGCGAGGAACGCCGAGAAAAGCTTTCGAGATATAGGAATAAGAAAACAAAGAGAAATTTTGGCAGGAAAATCAAGTATGCTTGCCGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAAACTGAAGAATCTGATGTCAAGAGGCAATGA 849 0.4276 MYAETGLLFPYFQNFSQELQQLEEYCKTQKSIASMSDFIQSAALSEYDLAAEGDLFKAPEPIIEEPVMDLDPMAAAISMISCGEDVVSPQGLKPTDMDALQTEQLLSEVFYECKKDILEKAAIESPLCEILDIKVPILNTDENQIQENKLIPDMPLPKSVSSGFLSSMDWMQGAAIKPTFLDFPGIDFNEVYGMRRAFSEGDIKALGNGNVSLIESPLERPFLISNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDVKRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1322 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 167 275 IPR045281 GO:0009909
Glsi10g1322 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Glsi10g1322 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1322 Glsi-ChrGlsi10 8962264 8966799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1322 213 277 C2C2-CO-like Transcription Factor Family AT3G21880 44.615 1.97e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi10g1322 CCT 7.5e-17 CL0281