Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1302 ATGGTTTACAGCAGTTGTATAAGGTCTTTGGTTGTTCAAGTTGGAACCTTCACCAATAAAGTGCAATTCAACAACATTGTGAGAAGTTTGCATAAAGTTCCCTCCATTACTTATTCGTGCAATCGTGGATTTAAGACAAGCATAGGGATGATGGTTGATACAGGTGCCATGTCAAGAGCGGGACCCATTGTTGATATGTTGCCAGAGAAAGACGATGATGGTGGGTTTGCCAGTGGAGGGTGGAAAAGCGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGAGGAAAGAGAGTGACAATGGAGGATTTCTATGATATAAAGACATCAAAGATTGATGGTCGATCAATATGCTTGTTTGGAATATTTGATGGTCATGGTGGTTCACGTGCTGCTGAGTATTTGAAGGAGCATCTCTTTGATAACCTCATGAAGCATCCTAAGTTTTTGACAGATACCAAATTGGCTATAAGTGAAACATATCAACAGACTGATGCTGATTTTCTGGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCAACAGCTTCAACAGCAGTTTTGGTTGACAACCATCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATTGCACTATCTGAAGATCATAAGCCTAATAGATGCGATGAGCGGAAGAGAATTGAGAATGCTGGCGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTTGGAGGTGTGCTAGCTATGTCCCGTGCTTTTGGTAATCGCATGTTGAAGCAGTTTGTTGTGGCAGAACCTGAGATCCAGGACCAGAAGATAGATGAAGAGATCGATCTGCTGGTGCTTGCAAGTGATGGACTATGGGATGTAGTACCTAATGATGATGCTGTTTCTCTTGCCCGCACTGAAGAAGAGCCCGAAGCAGCTGCTCGTAAGTTAACAGAAGCTGCTTTTACCCGCGGTAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGAGAAAGCAGACCCAGCTAATCCTGACAAAGCAGATCCAGGATCCAGCTAG 1062 0.435 MVYSSCIRSLVVQVGTFTNKVQFNNIVRSLHKVPSITYSCNRGFKTSIGMMVDTGAMSRAGPIVDMLPEKDDDGGFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTSKIDGRSICLFGIFDGHGGSRAAEYLKEHLFDNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQKIDEEIDLLVLASDGLWDVVPNDDAVSLARTEEEPEAAARKLTEAAFTRGSADNITCIVVRFHHEKADPANPDKADPGSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1302 353 Pfam Protein phosphatase 2C 91 328 IPR001932 -
Glsi10g1302 353 CDD PP2Cc 89 335 IPR001932 -
Glsi10g1302 353 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Glsi10g1302 353 FunFam Probable protein phosphatase 2C 76 81 341 - -
Glsi10g1302 353 PANTHER PROTEIN PHOSPHATASE 77 335 IPR015655 GO:0004722|GO:0006470
Glsi10g1302 353 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Glsi10g1302 353 SUPERFAMILY PP2C-like 86 336 IPR036457 -
Glsi10g1302 353 Gene3D - 81 342 IPR036457 -
Glsi10g1302 353 SMART PP2C_SIG_2 71 335 IPR001932 -
Glsi10g1302 353 SMART PP2C_4 79 333 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1302 Glsi-ChrGlsi10 8825307 8829849 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1302 1 341 PP2C-type Phosphatase Gene Family AT5G53140 71.388 0.0 516