Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1293 ATGGACAACATCGGAGTATTGGAGAGGAACCTTATAAATGAGCTAGCACAAGGTAGGGAGCTGGCAAGACAACTCCACATCTGTCTCCACGTGCCTTCTTTGTCCCAAGAAACCCGTGAGTTCTTGATCCAGAAAATCATAGCCTCATTTGACGAGGCACTTGCAATGCTAAACTGGAATGGTGGGTCGGCGCAGGGTGAGCCATCACAGCCCACAGCTGTTGGAATCCAAATAAAGAGCTTGACAAGGTGGACAAAACAGATTAAAGTTAGCCCAGGGATCGGAGGGGAAGGGCCTCTTGATGATGGACATAGTTGGAGAAAATATGGGCAGAAAGACATTCTCGGAGCCAAGTATCCAAGAGGCTATTATAGATGCACCCATAGAAATACTCAAGGATGCTTGGCCACAAGGCAAGTGCAAAGATGTGATGAAGACCCAACTGTATTCGACATCACGTACAGGGGAAAGCACACCTGCGCACAGGCATCCAATCTTGTAGTTTCTCCATCAGGCCCACAAGAAAATCAAGAACTAAATCCAAACACAGTTCCTCAGCAGCAGCTATCAGAGGAACTACTTCTGAACCTCCGGGCTGGGCTGAGAGTCCAAACAGAGAGCCTTGATATACCAGAGCAATCATTTGCTTCATTCCATTTCCCTTTAACCTCCAATATAAAAAATGAAAACCAAGTTTTTTCAACCCCTATGATTGAAAACAATTTTTCTGAAAACTTTAGTTCTCCTTTATATATGTCCCCTGCCACATCTGGGATAACCTACTTTTCAGTGTCTACAAGCGGGGTGAATAGCTTTGGTGGGCAGCCCAATTTGGCAAGTTCTGGCTCTGAGATCAATGACATTATGTCAGCCGTTACTTCAGCTGCGAACTCTCCAACCGTTGGATTGGAGCTTCCATTTGATCAGTTCGGATTGGACGGTCACAACTTCACATTTGATAACCCACGATTCTTCTAA 978 0.454 MDNIGVLERNLINELAQGRELARQLHICLHVPSLSQETREFLIQKIIASFDEALAMLNWNGGSAQGEPSQPTAVGIQIKSLTRWTKQIKVSPGIGGEGPLDDGHSWRKYGQKDILGAKYPRGYYRCTHRNTQGCLATRQVQRCDEDPTVFDITYRGKHTCAQASNLVVSPSGPQENQELNPNTVPQQQLSEELLLNLRAGLRVQTESLDIPEQSFASFHFPLTSNIKNENQVFSTPMIENNFSENFSSPLYMSPATSGITYFSVSTSGVNSFGGQPNLASSGSEINDIMSAVTSAANSPTVGLELPFDQFGLDGHNFTFDNPRFF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1293 325 Pfam WRKY DNA -binding domain 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g1293 325 FunFam WRKY transcription factor 53 86 163 - -
Glsi10g1293 325 SMART WRKY_cls 100 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g1293 325 ProSiteProfiles WRKY domain profile. 95 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi10g1293 325 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 78 246 IPR044810 GO:0003700
Glsi10g1293 325 SUPERFAMILY WRKY DNA-binding domain 98 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi10g1293 325 Gene3D WRKY domain 95 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1293 Glsi-ChrGlsi10 8742724 8743974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1293 9 261 WRKY Transcription Factor Family AT5G24110 38.951 2.31e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi10g1293 WRKY 1.6e-25 CL0274