Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1267 ATGGATAAGAGGTGGGTTTTTTGTGAGGGTCTTGGAAGTGTTGGGATGGCTAGGTGTTGGTTGGTTTGGATTTTGATTGTGGTGGGCAATGCGTGGTTGCTGGGTGTTGGGGTGGAAGGGTACCCAGTTGAGGATCTGGTGGTGACTTTGCCTGGCCAACCCGAGGTGGAGTTTAGGCAGTATGCTGGGTATGTAGATGTAGATGTCGAGCATGGAAGGAGCTTGTTCTACTATTTCGTGGAGGCAGAGAAAGACCCTCACAAGAAGCCCCTCGCCCTTTGGCTCAATGGAGGTCCAGGATGTTCCTCCGTTGGGGGAGGTGCTTTTACTGAATTAGGTCCCTTTTATCCTCAAGGAAATGGCCGTGGTCTCCGAAGAAATTCAATGTCTTGGAATAGAGCCTCCAACCTCCTGTTTGTGGAGTCTCCTGCCGGTGTTGGATGGTCATACTCAAATACATCTTCAGATTATGACTGCGGAGATGCGTCCACTGCCAATGATATGTATTTATTCATGCTGAAATGGTACGAAAAGTTTCCAACATACAGATCCAGGGAGCTGTTCCTTACTGGAGAAAGCTATGCAGGACACTACATACCACAGTTGGCTGATGCTCTACTGAACCATAATGTTGCTTCAACTGAATTCAAATTCAATATTAAAGGAGTTGCCATTGGAAACCCACTTCTGAGACTTGATCGAGATATTCCAGCCACATATGAATACTTCTGGTCACATGGAATGATTTCTGATGAAATTGGCCTTGCCATTATGAATGATTGCGATTTTGATGATTACGAATTTGCAAGTCCTCACAATGTGTCCCATTCATGCAACCATGCCATATCTGAAGCAAATCGCATTGTTGGCGATTATATAAACAGTTATGATGTGATTCTGGATGTTTGCTATCCATCCATTGTTGAGCAAGAACTGAGATTGAAAAAGATGGCTACGAAAATAAGCTTGGGTGTAGATGTTTGTATGAGTTTAGAAAGACGTTTTTATTTCAATCTCCCTGAGGTTCAGAAGGCTCTCCATGCAAATCGTACCAATCTACCTTATCCCTGGTCCATGTGTAGTGGCATTTTAAATTATAGCGATACTGATGGGAACATCAATATCCTTCCAATTCTCAAAAGGATAGTTCAAAATCATATCCCAGTTTGGGTTTTCAGTGGAGACCAAGATTCTGTTGTGCCATTACTGGGTTCCCGAACACTAATTCGCGAACTAGCTCATGACCTGAAATTCCAGATTACAGTCCCATATGGTGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTTACCGAATATGGAAATATGTTGACTTTTGCCACTGTAAGGGGGGCTGCTCACATGGTACCATATGCACAGCCATCAAGAGCACTGCATCTATTCAGTTCATTTGTGCGTGGTAGGAGGTTGCCAAACACAACTCGTCCTTCCATCGATGAATAA 1464 0.4419 MDKRWVFCEGLGSVGMARCWLVWILIVVGNAWLLGVGVEGYPVEDLVVTLPGQPEVEFRQYAGYVDVDVEHGRSLFYYFVEAEKDPHKKPLALWLNGGPGCSSVGGGAFTELGPFYPQGNGRGLRRNSMSWNRASNLLFVESPAGVGWSYSNTSSDYDCGDASTANDMYLFMLKWYEKFPTYRSRELFLTGESYAGHYIPQLADALLNHNVASTEFKFNIKGVAIGNPLLRLDRDIPATYEYFWSHGMISDEIGLAIMNDCDFDDYEFASPHNVSHSCNHAISEANRIVGDYINSYDVILDVCYPSIVEQELRLKKMATKISLGVDVCMSLERRFYFNLPEVQKALHANRTNLPYPWSMCSGILNYSDTDGNINILPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHDLKFQITVPYGAWFHKGQVGGWVTEYGNMLTFATVRGAAHMVPYAQPSRALHLFSSFVRGRRLPNTTRPSIDE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1267 487 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 48 461 IPR001563 GO:0004185|GO:0006508
Glsi10g1267 487 SUPERFAMILY alpha/beta-Hydrolases 45 477 IPR029058 -
Glsi10g1267 487 ProSitePatterns Serine carboxypeptidases, serine active site. 189 196 IPR018202 GO:0004185
Glsi10g1267 487 Gene3D alpha/beta hydrolase 43 304 IPR029058 -
Glsi10g1267 487 Gene3D - 328 364 - -
Glsi10g1267 487 FunFam Carboxypeptidase 41 305 - -
Glsi10g1267 487 Gene3D - 375 474 - -
Glsi10g1267 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Glsi10g1267 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Glsi10g1267 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Glsi10g1267 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Glsi10g1267 487 Pfam Serine carboxypeptidase 52 474 IPR001563 GO:0004185|GO:0006508
Glsi10g1267 487 FunFam Carboxypeptidase 375 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1267 Glsi-ChrGlsi10 8543284 8546586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1267 334 477 Calmodulin-binding Proteins AT2G22960 25.694 9.54e-11 59.3