Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1249 ATGTCTAAGGGAAGAGGCGGTGCAGCTCTGACTCTGGTCTCCCTGGTTGCGCTACTATGCCTGATGGTTCAGCTGGAACATGCAGATGCAGCAACTTATACAGTTGGGGGCCCTGGGGGTTGGACCTTCAACACTAATACTTGGCCCAAAGGAAAAAATTTTAGAGCTGGTGATGTGCTAATTTTCAACTACGATGCAACGAGCCACAGTGTGGTTGCGGTAGACAGAAGTGGGTACAGCAGCTGCAGCGCTCCGGCGGGTGCCAGAGTGTTGAGTTCAGGGAAAGACCAAATCAGGCTAGCAAGAGGGCAGAATTACTTCATATGCAACAATCCAGGGCACTGCCAATCTGGGATGAAAATTGCTATCAATGCAGTGTGA 381 0.5039 MSKGRGGAALTLVSLVALLCLMVQLEHADAATYTVGGPGGWTFNTNTWPKGKNFRAGDVLIFNYDATSHSVVAVDRSGYSSCSAPAGARVLSSGKDQIRLARGQNYFICNNPGHCQSGMKIAINAV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1249 126 CDD Plantacyanin 31 125 IPR041844 -
Glsi10g1249 126 Gene3D - 31 126 IPR008972 -
Glsi10g1249 126 PANTHER BLUE COPPER PROTEIN 26 124 IPR039391 GO:0009055
Glsi10g1249 126 Pfam Plastocyanin-like domain 41 119 IPR003245 GO:0009055
Glsi10g1249 126 ProSitePatterns Type-1 copper (blue) proteins signature. 103 119 IPR028871 -
Glsi10g1249 126 FunFam basic blue protein-like 31 125 - -
Glsi10g1249 126 SUPERFAMILY Cupredoxins 31 125 IPR008972 -
Glsi10g1249 126 ProSiteProfiles Phytocyanin domain profile. 31 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1249 Glsi-ChrGlsi10 8438203 8438660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1249 15 126 Phytocyanin Superfamily AT1G17800 41.525 5.33e-25 90.9