Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1242 ATGGCTACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCTACAGAATCAATCCTCCAAGGGTCTCTGTGGACAACGCCACTTGCCATGATTGTACTCTAATCAAGGTTGATAGCGTCAACAAACCTGGAATTCTGCTGGAAGTTGTACAAATTCTAACTGACCTTGACTTCATAATCACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAGGGAAAGAAGATAACAGACAGCAAAACCGTTGACTTAATAGAGAAGGCTCTAGGACCCAAGGACCAGAGCAACGAGGGGGTAAAGACTTGGTCAGGCAAAAGGGTTGGGGTGCACTCTGTTGGTGATCATACAGCCATTGAGCTCATTGGCAGAGACCGACCAGGTCTCTTATCCGAGATCTCAGCTGTCCTTGCCAGCCTCCACTTTAATGTGGTTGCAGCTGAAGTTTGGACTCATAATAGGCGAATAGCATGTGTTCTTTATGTCAATGATGCTGCCAGCCCATCTGTGAATGACCCAAACAAATTGTCTCTTATGGAGGAGCAACTCAACAATATCCTACGTGGATGTGAGGATGATGAGAAAGTGGCTCGCACCAGTTTCTCCATGGGTTTCACCCATATGGATAGGCGGCTCCACCAAATGCTGTTTGCAGATAGGGATTATGAATGTGCTGTTGTAACAACAGACGTTGATTATCCTCCCTCTTTCAGGCCAAATATCACAATAGAGCGTTGTGAGGAGAAAGGGTACTCAGTGGTTAGTGTCAAGTGCAAAGATCGAGCCAAACTGATGTTTGACATCGTTTGCACTCTCACTGACATGCAATATGTTGTTTTCCATGCCACAATTTCATCAGATGGCCCTTATGCATCCCAGGAGTACTTTATTCGGCACATGGACGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCATCAAATGTATTGAAGCTGCAATTCAAAGAAGAGTAAGCGAGGGTGTAAGCCTTGAGCTGTGTGCAAAGGATAGAGTGGGTTTGCTATCTGAAGTAACTAGGATTCTACGAGAGAATGGGTTGACAGTTTGCAGAGCAGGGGTGTCTACCATCGGGGAGCAGGCACTGAATGTGTTCTATGTTAGAGATGCTTCTGGGAATCCAGTGGACACGAAGACTATTGAAGCACTTCGCAAGGAAATTGGGCAGACAATGATGATCAGCGTGAAGAAGGTACCAGGCAATGCCAAAGCTCCTGTGAGCCGAGGATGGGCTAAAACAAGCTTCTTCTTTGGGAATTTGTTGGAAAGGTTCTTGAATTAA 1341 0.4526 MATVCWPYFDPEYENFSYRINPPRVSVDNATCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTVDLIEKALGPKDQSNEGVKTWSGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLASLHFNVVAAEVWTHNRRIACVLYVNDAASPSVNDPNKLSLMEEQLNNILRGCEDDEKVARTSFSMGFTHMDRRLHQMLFADRDYECAVVTTDVDYPPSFRPNITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTIGEQALNVFYVRDASGNPVDTKTIEALRKEIGQTMMISVKKVPGNAKAPVSRGWAKTSFFFGNLLERFLN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1242 446 SUPERFAMILY ACT-like 32 103 IPR045865 -
Glsi10g1242 446 CDD ACT_ACR_4 341 412 - -
Glsi10g1242 446 ProSiteProfiles ACT domain profile. 343 423 IPR002912 -
Glsi10g1242 446 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Glsi10g1242 446 Gene3D - 128 210 - -
Glsi10g1242 446 Gene3D - 338 418 - -
Glsi10g1242 446 ProSiteProfiles ACT domain profile. 37 122 IPR002912 -
Glsi10g1242 446 SUPERFAMILY ACT-like 339 408 IPR045865 -
Glsi10g1242 446 FunFam ACT domain repeat 6 341 419 - -
Glsi10g1242 446 CDD ACT_ACR_3 263 337 - -
Glsi10g1242 446 CDD ACT_ACR_1 35 105 - -
Glsi10g1242 446 Pfam ACT domain 37 85 IPR002912 -
Glsi10g1242 446 Pfam ACT domain 343 405 IPR002912 -
Glsi10g1242 446 Pfam ACT domain 130 198 IPR002912 -
Glsi10g1242 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 6 416 IPR040217 -
Glsi10g1242 446 SUPERFAMILY ACT-like 125 201 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1242 Glsi-ChrGlsi10 8404845 8408543 Dispersed/Wgd