Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1221 ATGCAGCTATATCATCATCCCTTCGACTTGGACAGCCAGAAGGTGAGACTTGCATTGGAAGAGAAAGGCATTGATTATACGTCTTACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCATCATTCTTCAAGATGAATTCCAGTGGAAGGCTCCCTGTTTTCCAAAATGGTTCTCACATCCTGTACGAGACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTAGTCTCCTCTGGCGCTGAGAGTATCAGTAGCAGTGGCAGGGAAGTTATTGAATGGATGCGGAAGATACAAGAGTGGGATCCGAAGTTTTTCACCCTTTCCCATATACCAGAGAAATACCGCCTTTATACTTCCAAGTTTATAAGGCGAGTGTTGATTGCTCGTATGTCTGAATCCCCCGAGTTAGCTGGAGCTTACCACCGGAAGTTGAGAGAAGCCTATCAGACTGAAGAAAAGTTGAAAGATCCAGATGTATTGAGTAGGAGTAAGGAGCATTTGGTTAGACTTCTTGATGAGGTGGAGAGGCAGCTAAGTGAAACGCCTTATTTAGCAGGTCAAGAGTTCACCATGGCTGATGTGATCCTCATTCCGTTGTTGGCTCGTTTAGTGCTGTTGGATTTAGAAAATGAATACATAGCTGGGAGGCCAAACATTGCTGAGTACTGGGTTTTGGTTCAGCAGAGGCCTAGTTATAAAAAAGTGATTGGTAGGTATTTTGATGGTTGGAGAAAGCACAAAATGTTATTAAAGACCTGGTGCTTTGTTCGTATTAGAAGTTTGCTAAAGAGATATTGGGAGTATGCCTTTTCTGAGGTAGCTGCTTCTTCTATGTACACTAATTTTGATCTTTGTACAAGGGATTACATTAATATAGTACCTGGCATCAAAGTTGATGACTCTGGTTTTATACATTTTCTTCTTCTTGCTTGGTTAACACCCATCATTAACCATAAATTGTCTCGGTACTGCTTGTTAAATGACTCGTACGTAATAGACTACAAACTCTGCACATTTCAATGTGAATTAGCCCTTTATACGAAGCCCTTTGAGTTTATAAAGAGTTGTTGGAACTAG 1083 0.4072 MQLYHHPFDLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSSFFKMNSSGRLPVFQNGSHILYETIDIIQYIERIAVVSSGAESISSSGREVIEWMRKIQEWDPKFFTLSHIPEKYRLYTSKFIRRVLIARMSESPELAGAYHRKLREAYQTEEKLKDPDVLSRSKEHLVRLLDEVERQLSETPYLAGQEFTMADVILIPLLARLVLLDLENEYIAGRPNIAEYWVLVQQRPSYKKVIGRYFDGWRKHKMLLKTWCFVRIRSLLKRYWEYAFSEVAASSMYTNFDLCTRDYINIVPGIKVDDSGFIHFLLLAWLTPIINHKLSRYCLLNDSYVIDYKLCTFQCELALYTKPFEFIKSCWN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1221 360 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Glsi10g1221 360 CDD GST_N_family 1 73 - -
Glsi10g1221 360 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Glsi10g1221 360 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Glsi10g1221 360 Gene3D - 132 238 - -
Glsi10g1221 360 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Glsi10g1221 360 CDD GST_C_family 147 225 - -
Glsi10g1221 360 Gene3D Glutaredoxin 1 75 - -
Glsi10g1221 360 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 120 251 IPR010987 -
Glsi10g1221 360 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Glsi10g1221 360 SUPERFAMILY GST C-terminal domain-like 136 239 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1221 Glsi-ChrGlsi10 8215281 8217129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1221 1 267 Glutathione S-transferase Gene Family AT1G77290 71.161 4.16e-144 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1221 10 8215281 8217129 Glsi10g1221 10 8215281 8217129 ECH