Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1210 ATGTCAACCCAGAATCGTCGTTCATCTTTTTCTACCTCGACGACATCATCTTTGGCGAAGCGGCATGCATCGTCGTCGGAGAATGTGGGAAAGGTTATGGCCGTCCCTCCACGCATGGCTAAGAAGCGAGCGCCTCTCAGTAACTTGACCAATCAGAAGAATGTGTCTCACAATGCTTCGCGGAACTCATTGCCATCTCTGGTACCATGTGCTACTAAAATTGCGAAGACAAACAAGGAACCCCCTGCATGCCCCAGCAGCTCAGCAATTTCCGGGACCAAATTACACAACTTGTCGAATGTTAAATCAAGTACAGTTGTTTTCCCAAAGGTTGCTTCATTTACTCAAAGGGATGAAGCTGCTCCTAAAGTTGCAGCTTTCGCTGTTCCAATTTCTACCAATGTGGATGTCAAATCAAGTGCAATTGCTTTTCCTAAAGTTCACTCGTTTCCACAAAGGGATGAAGCAACTCCTACAGTTGCCACTCTCACTATTCCTGTTTCAAGCAGCATGGATGTTTCTCCCAGTAAATCAGACGGGACGTCAGTTTCTATGGATGAGACTATGTCTACTTGCGATTCCTTCAAGAGTCCTGAAGTTGAATATATGGACAACAGCGAGAATTCAGCTGTTGATTCTATTGATAGAAAGACATTCAGCAGTCTGAACATCTCGGATAATACAGATACAGCAGGCTACATCTGTAACAGAGACATACTTGTTGAATTGGAAAGACAAGACAAAGTTGTCAACGTTGATAATAATTACATGGATCCACAGCTTTGTGCGACCTTTGCTTGTGACATCTACAAGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCTACTGACTTCATGGAGAAACTTCAAAAGGACATAAATCCCAGCATGCGTGCCATACTGATTGACTGGCTTGTGGAGGTGGCTGAAGAGTATCGACTTGTCCCTGATACCTTGTATTTGACAGTGAACTACATAGATCGGTATCTCTCAGGGAATGCCATGAATAGGCAGAAATTACAATTACTTGGTGTTGCTTGCATGATGGTTGCCTCTAAATATGAGGAGATTTGTGCGCCTCAGGTAGAGGAATTTTGTTATATAACTGATAACACGTACTTCAAAGAAGAGGTTCGGGGCGCATTTTGCAATTTTCAAGTTACTTATTTGCATTATTTGAAGCGTACAACTCTCCAACCAAATCATTGGATGCAGGTTTTGCAAATGGAGTCTGCTGTCTTGAACTATCTCAAGTTCGAATTGACGGCCCCAACAATTAAATGTTTCTTAAGACGATTTGTTCGTGCAGCCCAAGGAGCAAATGAGGTCCCATCATTGCAATTAGAGTGCTTGGCCAACTACATTGCTGAGCTGACTCTCTTGGAGTACAATATGCTTAAATTTGCCCCATCACTTATAGCTGCTGCCGCAATTTTTCTGGCAAAATATCTACTCTTCCCTTCAAAGAAACCATGGAATTCCACGTTGGAGCATTACACGCAATACCAGCCTAGTGATTTGTGTAACTGTGTAAAGGATCTCCATCGTCTGTGTTGTAACAGCCATAGTTCTAATTTGCCTGCAATCCGGGAGAAATACTGTCAACACAAGGGATTCTTCTTTCTTTTCCACATCTACAATGTAAAATGGTTTACCTTCCCCCCTCCGGTCTCACTTGTCTTGTAG 1689 0.4304 MSTQNRRSSFSTSTTSSLAKRHASSSENVGKVMAVPPRMAKKRAPLSNLTNQKNVSHNASRNSLPSLVPCATKIAKTNKEPPACPSSSAISGTKLHNLSNVKSSTVVFPKVASFTQRDEAAPKVAAFAVPISTNVDVKSSAIAFPKVHSFPQRDEATPTVATLTIPVSSSMDVSPSKSDGTSVSMDETMSTCDSFKSPEVEYMDNSENSAVDSIDRKTFSSLNISDNTDTAGYICNRDILVELERQDKVVNVDNNYMDPQLCATFACDIYKHLRASEAKKRPSTDFMEKLQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVACMMVASKYEEICAPQVEEFCYITDNTYFKEEVRGAFCNFQVTYLHYLKRTTLQPNHWMQVLQMESAVLNYLKFELTAPTIKCFLRRFVRAAQGANEVPSLQLECLANYIAELTLLEYNMLKFAPSLIAAAAIFLAKYLLFPSKKPWNSTLEHYTQYQPSDLCNCVKDLHRLCCNSHSSNLPAIREKYCQHKGFFFLFHIYNVKWFTFPPPVSLVL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1210 562 ProSitePatterns Cyclins signature. 299 330 IPR006671 -
Glsi10g1210 562 Gene3D - 282 380 - -
Glsi10g1210 562 SMART cyclin_7 429 517 IPR013763 -
Glsi10g1210 562 SMART cyclin_7 304 388 IPR013763 -
Glsi10g1210 562 Pfam Cyclin, N-terminal domain 268 379 IPR006671 -
Glsi10g1210 562 MobiDBLite consensus disorder prediction 1 41 - -
Glsi10g1210 562 MobiDBLite consensus disorder prediction 169 190 - -
Glsi10g1210 562 SUPERFAMILY Cyclin-like 425 538 IPR036915 -
Glsi10g1210 562 MobiDBLite consensus disorder prediction 1 24 - -
Glsi10g1210 562 PANTHER CYCLINS 210 534 IPR039361 -
Glsi10g1210 562 SMART Cyclin_C_2 425 547 IPR004367 -
Glsi10g1210 562 FunFam Mitotic cyclin 6 282 381 - -
Glsi10g1210 562 FunFam Cyclin A1 412 542 - -
Glsi10g1210 562 Gene3D - 410 542 - -
Glsi10g1210 562 Gene3D - 268 281 - -
Glsi10g1210 562 SUPERFAMILY Cyclin-like 258 380 IPR036915 -
Glsi10g1210 562 CDD CYCLIN_AtCycA_like_rpt1 258 421 - -
Glsi10g1210 562 Pfam Cyclin, C-terminal domain 425 538 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1210 Glsi-ChrGlsi10 8146258 8149570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1210 4 541 Core Cell Cycle Gene Families AT1G44110 53.235 1.05e-179 513