Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1207 ATGAAACAGAAACCTGGGTGGAGAAAGTTTCTGCCCTATGTAGGTCCTGGTTTCCTCGTCTCCTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTGCAAGCTGGAGCTAACCACAGATACGAGCTGCTGTGGGTGATACTTATTGGGCTATTATTTGCGCTCATCATTCAATCATTGGCTGCAAATCTTGGTGTAACCTCTGGCAAACACCTTGCAGAATTATGTAAAGTCGAGTACCCATTATTCGTCAGGTATTGCTTATGGTTGCTGGCCGAGGTTGCTGTCATAGCCGCAGACATACCCGAAGTGATTGGCACAGCCTTTGCGCTGAACATACTCTTCCACATTCCAGTATGGACAGGAGTTCTTCTGACTGGCTTCACCACTCTCTTGCTTCTTGGTATCCAGAGATTTGGGGTAAGGAAGCTGGAACTGCTGATAACAATACTAGTATTCGTAATGGCTGGATGTTTCTTTGGGGAAATGAGCTACGTAAAACCACCGGCTTCTGATGTATTGAAGGGAATGTTTGTGCCAAAACTCAGTGGGGAAGGAGCAACTGGCGATGCTATTGCCCTTCTCGGTGCCCTTGTCATGCCGCACAACCTCTTTCTCCACTCTGCTCTTGTGCTCTCTAGAAAGGTATCCAGCTCCGTGCGTGACATCAATGACGCATGCAGATACTTCCTGATAGAGAGTGGGTTCGCTCTGCTTGTAGCATTTCTAATAAACGTTGCAGTAGTTTCTGTATCAGGCACTGTATGCTCAGCCAACAACCTTCCAGGTGAAGACACAAATAGATGCAAAGATCTCAGCCTTGACGCTGCTTCTTTCCTTCTCCAGAATGTGTTGGGAAGGTCCAGCTCGACCGTTTATGCCATTGCACTACTGGCCTCAGGACAAAGCTCTACTATCACAGGCACCTACGCAGGGCAATATATTATGCAGGGATTCTTGGAGCTGAAGATGAAAAAATGGAAGAGGAACTTGATGACTAGGTGTATTGCCATAACACCTAGTCTTATTGTCTCCATTATTGGTGGACCATCAGGGGCAGGCCGCCTTATTATCATTGCATCGATGATACTTTCGTTTGAGCTTCCATTCGCTTTAATTCCGCTCCTTAAGTTTAGCAGCGGCAGTGCCAAGATGGGTCCTCACAAGAATTCTAAAATCATCATTGTCATTTCATGGATCCTAGGCGTTGGAATAATCGGTATCAATGTGTACTACCTCAGCACAGGCTTCGTGGGTTGGTTAATTCATAGCAGTCTTCCAAAGGTGGCAAATGTGTTCATCGGGATCATAGTGTTTCCTCTTATGGCAATTTATATACTCGCAATTATCTATCTAACCTTCAGAAAAGATACTGTTGAGACATATAAAGAGACAACTACCGACCCGGTAGTGCAAATCCACATGGAGCAAGTAGAATCGGGTCATGTCCCTTATAGAGAAGATCTTGCTGATATCCCACTACCGGATTAG 1494 0.4558 MKQKPGWRKFLPYVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLLFALIIQSLAANLGVTSGKHLAELCKVEYPLFVRYCLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWTGVLLTGFTTLLLLGIQRFGVRKLELLITILVFVMAGCFFGEMSYVKPPASDVLKGMFVPKLSGEGATGDAIALLGALVMPHNLFLHSALVLSRKVSSSVRDINDACRYFLIESGFALLVAFLINVAVVSVSGTVCSANNLPGEDTNRCKDLSLDAASFLLQNVLGRSSSTVYAIALLASGQSSTITGTYAGQYIMQGFLELKMKKWKRNLMTRCIAITPSLIVSIIGGPSGAGRLIIIASMILSFELPFALIPLLKFSSGSAKMGPHKNSKIIIVISWILGVGIIGINVYYLSTGFVGWLIHSSLPKVANVFIGIIVFPLMAIYILAIIYLTFRKDTVETYKETTTDPVVQIHMEQVESGHVPYREDLADIPLPD 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1207 497 Hamap Divalent metal cation transporter MntH [mntH]. 1 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 NCBIfam Nramp family divalent metal transporter 15 379 - -
Glsi10g1207 497 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 8 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 4 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 Pfam Natural resistance-associated macrophage protein 31 393 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 PRINTS Natural resistance-associated macrophage protein signature 192 215 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 PRINTS Natural resistance-associated macrophage protein signature 89 115 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 PRINTS Natural resistance-associated macrophage protein signature 302 321 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 PRINTS Natural resistance-associated macrophage protein signature 362 381 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 PRINTS Natural resistance-associated macrophage protein signature 330 347 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 PRINTS Natural resistance-associated macrophage protein signature 117 136 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi10g1207 497 PRINTS Natural resistance-associated macrophage protein signature 142 163 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1207 Glsi-ChrGlsi10 8127646 8131010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1207 3 497 Inorganic Solute Cotransporters AT1G15960 61.010 0.0 619