Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1202 ATGGAAGCTATTTCAACTCCAAAGAAATCTCTAAAATTATGCTTCCACCCATCCCATCATATACCATTATTGCTCTGGACAATTCTGAATCCCCCATTTTGTCCTTCAATGGAGCAGGAAGAGAGCAAACAATCTTCCCAAAAAGAACCATACACCGAACTCGAGCAAGTTAACTCAGATTTTATTCTGGCAATTAGTTTGCAAGAGCAAGAGACAACATTCACCATGCTTGCCATGATTGACAGTGAAAGTGATGAAGATCCAAGTGAGGCCTCTTTTGATAATGATAATGACAATGATGCTGATGCTGATTTTTTCGAAAGCCTGGAGTTTGAAGCTGATCTTCTGTTTCTCGAAGGCGAAGGAAGCAATAATAGTAGTGACGAAGATGATATTGATCCAGATGAATTATCTTATGAAGAGTTGATTGAGTTGGGAGAGTTTATGGGAGAAGAGAAGAAGGGATTATCAGCAAATAATATTCCTTCATGCTTGCAGTCTTACCATTTTGCCGAAAGCAAAAATGGTATCGATTGCTGTGTGATTTGTCAGGTTGAATATGAAGAAGGTGAAGCCCTTATGGCCCTTCAATGTAATCACCCTTATCATACAGATTGCATAAGCAAGTGGCTTCAAATTAAGAAGGTCTGCCCAATATGTACCAGTGAAGTTTCAACTCCCAAGATGGCTAAGAACCCTTGA 702 0.3946 MEAISTPKKSLKLCFHPSHHIPLLLWTILNPPFCPSMEQEESKQSSQKEPYTELEQVNSDFILAISLQEQETTFTMLAMIDSESDEDPSEASFDNDNDNDADADFFESLEFEADLLFLEGEGSNNSSDEDDIDPDELSYEELIELGEFMGEEKKGLSANNIPSCLQSYHFAESKNGIDCCVICQVEYEEGEALMALQCNHPYHTDCISKWLQIKKVCPICTSEVSTPKMAKNP 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1202 233 SMART ring_2 180 220 IPR001841 -
Glsi10g1202 233 SUPERFAMILY RING/U-box 179 227 - -
Glsi10g1202 233 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 38 105 IPR043312 -
Glsi10g1202 233 ProSiteProfiles Zinc finger RING-type profile. 180 221 IPR001841 -
Glsi10g1202 233 FunFam E3 ubiquitin ligase BIG BROTHER-related 148 227 - -
Glsi10g1202 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 230 IPR013083 -
Glsi10g1202 233 Pfam RING-H2 zinc finger domain 178 220 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1202 Glsi-ChrGlsi10 8103621 8104322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1202 129 224 C3H Transcription Factor Family AT3G63530 52.000 8.95e-29 107