Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1195 ATGGCAGAGCGTGTGTCACTCACACTATCATTGCCATTACCATCCCAACCGTCTCCTACCAAAATGGCTGCTTTTGGTGGTGGCGCCGCCGCCGTCTCTTCTCGTATCATCTCCTCCGCTACCAGAGCCTCGGTCTCCTTTGCTTCTGCTTCTCGTTCCTCTTCCCTATTCTCTTCCTCCACCTCTTATTCTTACTCTTCCACTTCTCTCTCCTCGCTCAAATGCCTAAGATCATCTCCTCGCATTTCTCACCTCTTCCTCCATCAGCGAAGAGCCGAGGTTCGTTCCTCGAGTGGAGGATATAGCACAGTGTCTGCGCCGAAGTCATTTGCGTCCGATCCTGGTCAATTGAGGAGCGCTAGAGAAGATATTAAGGAGCTTCTCAGGACTAAGTCCTGCCATCCAATACTGATTCGCTTAGGGTGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAGTTGAGCTGAAACATGGAGCCAATGCTGGACTCGTAAATGCATTGAATCTTCTTCAGCCAATCAAAAACAAGTACTCTGCTGTGACATATGCAGACTTATTTCAGTTGGCCAGTGCTACCGCTGTAGAGGAGGCCGGAGGCCCAAAAATCCCTATGAAGTATGGAAGAGTGGATGCCTCTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGTCCTGCTTCACCTGCTGATCATTTACGGCAAGTTTTCTACAGAATGGGATTAAACGACAAGGAAATAGTTGTATTATCTGGTGCACACACACTGGGGCGGTCTAGACCAGAACGTAGTGGGTGGGGCAAGCCTGAGACCAAATATACGAAAGAGGGGCCGGGGGCACCTGGTGGGCAATCCTGGACAGTGCAATGGTTGAAATTTGACAACTCTTACTTCAAGGATATCAAAGAAAGAAAGGATGAAGATCTATTGGTCTTGCCAACTGATGCTGTTCTTTTTGAAGATCCATCATTCAAGGTATATGCTGAAAAATATGCTGAAGATCAGGAAGCATTCTTTCAAGATTATGCTGAAGCCCATGCCAAACTCAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGTATTGTGATAGATGATGTACTCATCTGGAAAGAGAGAACTGTCAGAGGTTATGAAGCAGAAGATTTGAGCTTACCATGA 1215 0.4708 MAERVSLTLSLPLPSQPSPTKMAAFGGGAAAVSSRIISSATRASVSFASASRSSSLFSSSTSYSYSSTSLSSLKCLRSSPRISHLFLHQRRAEVRSSSGGYSTVSAPKSFASDPGQLRSAREDIKELLRTKSCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHGANAGLVNALNLLQPIKNKYSAVTYADLFQLASATAVEEAGGPKIPMKYGRVDASGPEQCPEEGRLPDAGPASPADHLRQVFYRMGLNDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTVQWLKFDNSYFKDIKERKDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFQDYAEAHAKLSNLGAKFDPPEGIVIDDVLIWKERTVRGYEAEDLSLP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1195 404 MobiDBLite consensus disorder prediction 275 299 - -
Glsi10g1195 404 PRINTS Plant ascorbate peroxidase signature 113 133 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PRINTS Plant ascorbate peroxidase signature 333 357 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PRINTS Plant ascorbate peroxidase signature 134 149 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PRINTS Plant ascorbate peroxidase signature 214 226 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PRINTS Plant ascorbate peroxidase signature 195 213 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 CDD ascorbate_peroxidase 105 375 - -
Glsi10g1195 404 Pfam Peroxidase 121 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 ProSiteProfiles Plant heme peroxidase family profile. 137 381 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 90 374 IPR044831 GO:0004601|GO:0034599
Glsi10g1195 404 ProSitePatterns Peroxidases proximal heme-ligand signature. 264 274 IPR019793 -
Glsi10g1195 404 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 120 245 - -
Glsi10g1195 404 Gene3D Peroxidase, domain 2 242 365 - -
Glsi10g1195 404 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PRINTS Haem peroxidase superfamily signature 196 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PRINTS Haem peroxidase superfamily signature 214 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PRINTS Haem peroxidase superfamily signature 134 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 PRINTS Haem peroxidase superfamily signature 304 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 SUPERFAMILY Heme-dependent peroxidases 113 373 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi10g1195 404 Gene3D - 120 373 - -
Glsi10g1195 404 MobiDBLite consensus disorder prediction 227 246 - -
Glsi10g1195 404 FunFam L-ascorbate peroxidase T, chloroplastic 242 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1195 Glsi-ChrGlsi10 8053803 8059289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1195 195 373 Peroxidase AT4G17690 32.843 4.40e-19 85.9