Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1192 ATGGAGGCGGAATCAGATCTCGTGGACACCAGTAAGCTGCAGCAGGAAGAGGATCAGCATTTCCATGTCTTAGCAGTGGATGATAGTCTCATAGATATGAAGCTTTTGGAGAAGCTCCTTAAAGTTTCTTCATGCAAAGTCACCTGTGTGGACTCTGGGGACAAGGCTCTGAAATATCTTGGCCTGCTTGATGACCTTGATAATGCTTCCTCAACTTCTTCAGAATCATCACCTTCTTCTCCTGAATCACCCCAACAAGAGGGAATGAAAGTGAATTTGATCATGACAGACTACTGCATGCCAGGGATGAGTGGTTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTACCAGTTGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGAAGGGGCAGAGGAGTTTCTACTGAAGCCACTTAAGTTAGCAGATTTGAAGAAGCTTCAGCCGTACCTTCTGAAATCCCTCAATAATTCTTGTGAACAAGAATCTGCTAACAGTACCACAGCTACCGACAGTGACAGCAACAGCAGCAATAACAGTGATAATAACAACAATAGTAATGTCAAAAGGAAGGCCATGTCTCCTGAACCTTCGGACAGATCAAGACCAAAAAAATGA 651 0.4286 MEAESDLVDTSKLQQEEDQHFHVLAVDDSLIDMKLLEKLLKVSSCKVTCVDSGDKALKYLGLLDDLDNASSTSSESSPSSPESPQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLKLADLKKLQPYLLKSLNNSCEQESANSTTATDSDSNSSNNSDNNNNSNVKRKAMSPEPSDRSRPKK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1192 216 CDD REC_typeA_ARR 23 158 - -
Glsi10g1192 216 Pfam Response regulator receiver domain 88 157 IPR001789 GO:0000160
Glsi10g1192 216 MobiDBLite consensus disorder prediction 172 203 - -
Glsi10g1192 216 Gene3D - 7 171 - -
Glsi10g1192 216 SUPERFAMILY CheY-like 21 163 IPR011006 -
Glsi10g1192 216 SMART REC_2 21 159 IPR001789 GO:0000160
Glsi10g1192 216 MobiDBLite consensus disorder prediction 172 216 - -
Glsi10g1192 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 198 IPR045279 GO:0009736
Glsi10g1192 216 ProSiteProfiles Response regulatory domain profile. 22 163 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1192 Glsi-ChrGlsi10 8027853 8030156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1192 18 165 Response Regulator Gene Family AT3G57040 60.403 7.71e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi10g1192 Response_reg 3.3e-14 CL0304