Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1165 ATGATTCAACGAATTCTAGTAATTGTTTGGAAGATGGGTGTTTATTGTAAATGGATAAGGGAATCAGTGTGGGGTTTGGGTATTGAGGTGAGAGAGTTAGTGGCTTGGACGAGTGACAGAGAGACAACTGAGATGGGAAAGTTAAGCAATGGATTCCGTCAGGTGAAGCCCTACCTTGCTATGGTGTCCCTTCAGTTTGGGTACGCTGGGATGTATATTATCACCATGGTTGCTTTCAAGCATGGCTTGAGCCATTGGATACTCTCTGTCTACCGTCATGTAGTTGCCACTCTTATCATGGCCCCTTTTGCGTTTGTTCTCGAAAGAAAAATAAGGCCAAAGATGACTCTCCCCATCTTCTTGAGGATAGTGGCGCTTGGTTTCCTTGAGCCAGTGCTTGATCAGAACTTGTACAACATGGGGATGAAGAACACCTCCACAACGTTTGCTTCTGCCACCGTTAATGTCCTCCCGGCCATTACTTTTGTAATGGCGCTCATTTTCAGGTTAGAGTCAGTGAACTTAAGAAATATTCACAGCCTAGCCAAGGTAATTGGCACTGCAATAACAGTATCAGGAGCCATGGTTATGACTTTGTACAAAGGTCCAGCCCTTCATATCATAACGGGAGGAGCAGCAGCGAGTCAACATGATGCCGCCGGCACCGAGCCCTCTGAGCAGCACTGGGTGCTTGGCACATTAATGCTCATATCAAGTTGCGGTGGTTGGGCTAGCTTCTTCATTTTGCAATCATTCACTTTGAAGTTGTACCCAGCGGAGCTCTCGCTCACAGCTTGGATTTGCCTTCTGGGTATTTTTGAGAGTGCAATCGCGTCGCTTATTATGGAACGGCACATGAGCGTCTGGGTCATAGGCTGGGACTCTAGGCTCCTCGCTTGTGTTTATTCTGGGCTAGTATGTTCTGGAATGGCATACTATATACAAGGAGTTGTGACCAAAGAACGTGGACCAGTATTTGTGACTTCTTTCAGCCCTCTATGTATGATTATCACTGCTGCATTGGGTTCCATTATTTTAGCTGAGCAAGTTCACCTGGGAAGTATAGTTGGAGCCATTTTCATTGTCTTCGGACTTTACACCGTGGTATGGGGGAAAAGCAAAGACCGTCCAAACATAACCGAAACAGAGAAAGGTGAAGGCCATGAATTGCCAATACAAGACAGTACAAGATCAGGAACAGACAATTTTGATAACATCGAGGTCAATGTTCCTGCTGATATGCTGAGGGGCTCAGGGAAGAAAGTCCCACCACCAGCAAGATCTTGA 1287 0.4608 MIQRILVIVWKMGVYCKWIRESVWGLGIEVRELVAWTSDRETTEMGKLSNGFRQVKPYLAMVSLQFGYAGMYIITMVAFKHGLSHWILSVYRHVVATLIMAPFAFVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKNTSTTFASATVNVLPAITFVMALIFRLESVNLRNIHSLAKVIGTAITVSGAMVMTLYKGPALHIITGGAAASQHDAAGTEPSEQHWVLGTLMLISSCGGWASFFILQSFTLKLYPAELSLTAWICLLGIFESAIASLIMERHMSVWVIGWDSRLLACVYSGLVCSGMAYYIQGVVTKERGPVFVTSFSPLCMIITAALGSIILAEQVHLGSIVGAIFIVFGLYTVVWGKSKDRPNITETEKGEGHELPIQDSTRSGTDNFDNIEVNVPADMLRGSGKKVPPPARS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1165 428 MobiDBLite consensus disorder prediction 377 405 - -
Glsi10g1165 428 SUPERFAMILY Multidrug resistance efflux transporter EmrE 276 374 - -
Glsi10g1165 428 MobiDBLite consensus disorder prediction 377 391 - -
Glsi10g1165 428 PANTHER WAT1-RELATED PROTEIN 56 380 IPR030184 GO:0016020|GO:0022857
Glsi10g1165 428 SUPERFAMILY Multidrug resistance efflux transporter EmrE 91 201 - -
Glsi10g1165 428 Pfam EamA-like transporter family 69 188 IPR000620 GO:0016020
Glsi10g1165 428 Pfam EamA-like transporter family 231 369 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1165 Glsi-ChrGlsi10 7851048 7853770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1165 54 409 Nodulin-like Gene Family AT4G08300 64.246 3.65e-165 467