Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1164 ATGGTTGAGGTGAGATATTGTGAGAAAGTATTTGGGTGGTTGAGGAGGGCGAAGGTATATCTGCTGATGTTAGGGTTGCAATTCGGGTCGGCGGGCATGTACATTCTGACCAAGGATGCTCTCAACAAGGGCATGAGTCATCACGTGTTCATCGTCTACCGTAATGTCATCGCCGCCATAACTCTTGGCCCCTTCGCAGTTGTTCTTGAAAGGAAAGTAAGGCCCAAGATGACATTTCGGATTTTTTGGGAGATTATGGCGCTGGCTTTTCTTGAGATAATACTTGATCAATGCTTCACGCTCTTGGGCATGAAATTAACGTCGGCATCATTTACATCGGCTGTGACGAACTCCATACCTTCCATTACCTTTGTGTTGGCCATCATTCTACGATTGGAGCACATGAAGATAAAGGAGGTAAGATGTCAAGCGAAAGTAATTGGGACTGCAGTAACTTTGGGAGGGGCCTTGCTAATGGCACTATACAAAGGGCCCGTAGTGGATGTTGCGGGGCCATCGAGCAGCCATGCAGGTCATCCTAAGAATGTCAACGACCCTACTGGCGCACACTGGGTTATGGGAGCATCTTTCCTCCTCGTAGGTTGTGTAGCCTGCTCTGCTTTTAACATATTGCAAGCCATAACATTGACGAAGTACCCAGCAGAGATGTCCCTGGCCACTTGGATATGCTTTGTGGGCTCATTTCAAAGCGTTGGCATAGCTGCTTACATGGAGCGCCACCGTCCTCATGCTTGGTCTATTTCCTGGGATTCAACCCTCCTTGCTACTGTCTACACGGGGATAGTTGTATCAGGAATCCAATATTACGTGCAAGGCCTGGTTATGAAGACAATGGGCCCAGTGTTCGTGACTGCCTTCAATCCTCTGCGTATGGTCATCATCACGGCCCTCGCCTGCATCATCCTATCCGAGCAACTCCACCTTGGAAGTATTATCGGAGCAGTTGCGGTAGCCATGGGGCTATACCTAGTTGGATGGGGGAAATATAAAGAACAGAAAAGTGTGATGCCAGCGTCCCCTGCAAAAGAAAGCTATCAGCTACCAGTAACAGCACCCAGAACTGATAGAACTGATAGAAATAATGATAATAATGCTCAGTTGTTCGTTACTGGGGATAAAAACAGCACCGTGGAAACCAGAATATCAAATACAGAAAGCCAGGAGTCACAGTGA 1194 0.4765 MVEVRYCEKVFGWLRRAKVYLLMLGLQFGSAGMYILTKDALNKGMSHHVFIVYRNVIAAITLGPFAVVLERKVRPKMTFRIFWEIMALAFLEIILDQCFTLLGMKLTSASFTSAVTNSIPSITFVLAIILRLEHMKIKEVRCQAKVIGTAVTLGGALLMALYKGPVVDVAGPSSSHAGHPKNVNDPTGAHWVMGASFLLVGCVACSAFNILQAITLTKYPAEMSLATWICFVGSFQSVGIAAYMERHRPHAWSISWDSTLLATVYTGIVVSGIQYYVQGLVMKTMGPVFVTAFNPLRMVIITALACIILSEQLHLGSIIGAVAVAMGLYLVGWGKYKEQKSVMPASPAKESYQLPVTAPRTDRTDRNNDNNAQLFVTGDKNSTVETRISNTESQESQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1164 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Glsi10g1164 397 MobiDBLite consensus disorder prediction 351 397 - -
Glsi10g1164 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 337 - -
Glsi10g1164 397 PANTHER WAT1-RELATED PROTEIN 20 346 IPR030184 GO:0016020|GO:0022857
Glsi10g1164 397 MobiDBLite consensus disorder prediction 368 397 - -
Glsi10g1164 397 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
Glsi10g1164 397 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1164 Glsi-ChrGlsi10 7843344 7845951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1164 14 383 Nodulin-like Gene Family AT2G39510 45.308 1.43e-111 330