Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1163 ATGGAAGAAACATGTGTAGGGAAGGTGATAAGTAAGGCAAAGCCTTATTTGTTGATGGTGGGGTTGCAATTTGGGTTGGCGGGAACATACATCTTCGCCATGGACAGTATGAAGCGCGGAATGAGTCGTTTTGTGTTCATTGTGTACCGCAATGCCATTGCTGCAGTTGCCCTCGCTCCTTTTGCTCTCTTTTTTGAAAGGAAAATTAGGCCAAAGATGACAATCTCTGTCTTCTTACAGATCATGGCGCTTGGATTTCTGGAGCCAGTAGTTGACCAAGGTTTTACTTTCTTGGGGATGCAATACACTTCGGCTTCCTTTGCATCTGCAATTATGAATGCCGTGCCCTCTGTCACCTTTGTGATTGCAGTACTTCTTCGGTTAGAGCGTGTAAAGTTAAAGGAGGTACGAAGTCAAGCGAAGGTGATTGGAACCTTGGTAACCTTTGCAGGGGCTCTGTTAATGACACTTTACAAAGGTCCTCTAGTCCACTTGTTTCATTCTCAAATTACAACCCAACACCAACATACCACCCCCACCCCTCCCACCTCCACACACTGGCTCTCAGGCACCCTTTTTATACTCCTAGGTTGTGTGGCTTGGTCTTCCTTCTTCATTTTGCAGGCCATAACACTTAAAAGATACCCAGCGGAACTATCACTGGCGTCCTTGATATGCTTCGTGGGTGCTTTGCAAAGTGCAGTGGTGGCGCTCGTAGCTGATCATCACCCTCGGGCGTGGGCTATTGGTTGGGACTACAGGCTCTTTGCTCCTCTCTACACAGGACTAGTTAGCTCAGGAATTACGTATTATGTGCAAGGGCTGGTAATGAAAAGAAGAGGCCCAGTGTTTGTGACGGCCTTTAATCCTCTTTGCATGATTGTTGTCGCTGCTTTGGGCTCCCTTCTTCTAGCTGAACAGCTCCACTTCGGAAGTATCATAGGGAGCATCATTATCACAGTGGGTGTCTACTCAGTTATGTGGGGTAAAGGCAAAGACTATTCAGACCTCAACCCACCATCAAACGACACACAAAACTTGCCAATCACCTCATCTACAGATTTTTCCAAAATGGATACTGCTCCCCATACCAAAAAGTGA 1101 0.4659 MEETCVGKVISKAKPYLLMVGLQFGLAGTYIFAMDSMKRGMSRFVFIVYRNAIAAVALAPFALFFERKIRPKMTISVFLQIMALGFLEPVVDQGFTFLGMQYTSASFASAIMNAVPSVTFVIAVLLRLERVKLKEVRSQAKVIGTLVTFAGALLMTLYKGPLVHLFHSQITTQHQHTTPTPPTSTHWLSGTLFILLGCVAWSSFFILQAITLKRYPAELSLASLICFVGALQSAVVALVADHHPRAWAIGWDYRLFAPLYTGLVSSGITYYVQGLVMKRRGPVFVTAFNPLCMIVVAALGSLLLAEQLHFGSIIGSIIITVGVYSVMWGKGKDYSDLNPPSNDTQNLPITSSTDFSKMDTAPHTKK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1163 366 MobiDBLite consensus disorder prediction 339 358 - -
Glsi10g1163 366 MobiDBLite consensus disorder prediction 339 366 - -
Glsi10g1163 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 331 - -
Glsi10g1163 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Glsi10g1163 366 Pfam EamA-like transporter family 26 156 IPR000620 GO:0016020
Glsi10g1163 366 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Glsi10g1163 366 PANTHER WAT1-RELATED PROTEIN 14 334 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1163 Glsi-ChrGlsi10 7833039 7835083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1163 7 362 Nodulin-like Gene Family AT1G44800 48.209 4.08e-124 360
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1163 10 7833039 7835083 Glsi10g1163 10 7833039 7835083 ECH