Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1162 ATGACCGCCGAAAAACTGTCAGGGAGATTAAGGCCGGTGTTGACAAAAGCAAAGCCATATCTGTTAATGATTGGCTTGCAATTTGGCATGGCGGGGAATTACATCTTCGGCAAGGACATTCTCAACCACGGCATGAGTCGTTTTGTGTTCATTGTCTACCGCAATTTCGCGGCTGCAACCTTCCTCGCTCCTTTCGCATTGATCTTTGAAAGGAGAAGTAGGCCCAAGATGACACTCCCTGTTTTTCTACAGATAATGACATTGGGATTTCTGGAGCCAGTCTTTAATCAGAGCTTCACTTACTTGGGGATGAAATACACTTCGGCTTCATTCACTTCTGCTATTATGAACGCTGTGCCCTCTATCACCTTTCTGCTCGCAGTCATTCTCCGGTTGGAGCGTCTAAAACTGAAGGAGATTCGGAGTCAAGCCAAAGTGATCGGAACATTAGTAACCTTTGGAGGAGCTTTGGCGATGGCAATATACAAAGGTCCTGGGTTCAACCTCTTTCATTCTGGGAGCAGAGCCCACCATGAAGATAGCAGCCACTCGTCTCACAGCCACCAGACAAGCGGCTGTCTCTATATACTAATGGGCTGTGTGGCCCTCTCTGCTTTCTACATTTTGCAGTCGATCACAGTGAAAAGATACCCAGCGGAACTGTCACTGGCCACTATGATATGCTTGGTGGGTGCTCTGCTAGGTACAGCAGTGGCGCTTGTGGCCGAGCCTCACTCCCGGGCCTGGGCTATCGGCTTGGACTATAGGATTTTCGCTCCTCTCTACACGGGAATAGTTAGTTCAGGACTGGCTTATTACATTCAAGGGGTGGTGATGAAACTGAGAGGGCCCGTATTTGCTACAGCCTTCAATCCTCTGTGCATGGTCATAGTTGTTGGTTTGGCCTCCCTGATTTTAGGAGAGCAACTCCGTCTCGGAAGTATCATAGGAGGCGTCATCATCGCAGTGGGCCTCTACTCTGTTGTGTGGGGTAAAGCCAAGGACTACTCAGATCCCGAGGCATCGCCAGAAGGGGACACGGACACCCTAAAACCGCCACATGCTGCACCTGATGATTTCAAAATAGACATCCAGCCCCCATCACCCAACCCCAAACTAGAGCTATCCAACTCCAAAGTGTGGACATCCAGCCCAGGCAGTGCTTCTGCTTCATGCGACTGCCAAGAGATGGATATAACCCGCGCACTTCGCTTTCTTCTTATGATTTTGCTTTTGGTTGGTTTAGCGGATGAAGAGAAGGACCTTGTTATCATTTCTTTCTCTTTATCTCTGATTTTGATTGCTGAGCTATGCAATGGACTACCTTATGTATCGATCTCTTTCTCCTTTGGCCCAAAAAAGAAGAAGATAGATATAGAGATGTTCAACAGCTCAACTTAA 1401 0.4804 MTAEKLSGRLRPVLTKAKPYLLMIGLQFGMAGNYIFGKDILNHGMSRFVFIVYRNFAAATFLAPFALIFERRSRPKMTLPVFLQIMTLGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFLLAVILRLERLKLKEIRSQAKVIGTLVTFGGALAMAIYKGPGFNLFHSGSRAHHEDSSHSSHSHQTSGCLYILMGCVALSAFYILQSITVKRYPAELSLATMICLVGALLGTAVALVAEPHSRAWAIGLDYRIFAPLYTGIVSSGLAYYIQGVVMKLRGPVFATAFNPLCMVIVVGLASLILGEQLRLGSIIGGVIIAVGLYSVVWGKAKDYSDPEASPEGDTDTLKPPHAAPDDFKIDIQPPSPNPKLELSNSKVWTSSPGSASASCDCQEMDITRALRFLLMILLLVGLADEEKDLVIISFSLSLILIAELCNGLPYVSISFSFGPKKKKIDIEMFNSST 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1162 466 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Glsi10g1162 466 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020
Glsi10g1162 466 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Glsi10g1162 466 PANTHER WAT1-RELATED PROTEIN 18 336 IPR030184 GO:0016020|GO:0022857
Glsi10g1162 466 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1162 Glsi-ChrGlsi10 7827980 7832064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1162 9 378 Nodulin-like Gene Family AT2G37460 46.631 1.19e-115 343