Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1150 ATGGAATTTCTCTTCATCTTCCTTCTGTTTACTGTCGTTTCTGCTTACTCTTTTTCGGATTATATCAATCCTAATTTCACTGCTTCACATCTTCAATTCATTGATAACTCTGGCACCTTCTTGTCGTCTCCCAATGCAACATTCCACGCTGCTATATTCAATCCCGGTGGTCAACAAACCAAATTCTACTTGTGTGTCATTCACGTGTCCTCCAACACCATCATTTGGTCTGCTAATCGTGATGCTCCCATCTCAAGTTCTGCGAAAATGAATTTAACCCTCAAAGGGATTACTATTGTGGACGATGCTGGAACTCTCAAATGGTCAACTCCATCCTTGAAATCACCAGTATACGCATTACAACTAACTGATATGGGCAATCTTGTCTTGCTTGATCGTTCAAATGCTTCTCTTTGGGAGAGCTTCCGGCATCCAACCGACACAATTGTTATCGGACAGCAATTACCTGTGACGACATTGCTGTCAAGTGCTGTATCAGACTCTGACTTGTCAACTGGCGATTACAAGCTCAGAATTACTGCATCTGATGCCATACTTGAGTGGCATGGACAGACATATTGGAAACTGTCAATGGCTACAAAAGCCTTCCAGACATCAAATCATATGGTGGAATACATGGCTATAAACACAAAAGGTCTTTATCTCTTTGGAAGTGATGGAACAGTGACAGTGTTTGAGGTGGTCTTGCCTCTGGCTAATTTCCGAATTGCCAAATTGGCTGCCCCTGGCCAGTTTGCTGTCAAAAGCTTTTCTGGTACTGAATGGAAGCAGGAATTTGTGGGGCCAGACGATGGTTGTCAAACTCCCTTTATTTGTGGAAGAGTGGGATTATGTACTGATAGCACTACATCCTCTACTCCTACTTGCTCTTGTCCCCCTAACTTCCATGCAGGCTCCCGTAATTCTTTTGGTTGTGTGCCGAGTAACGGTTCGTATTCTTTGCCATTTGCTTGTAATTCGTCTGGTTATGATAGTCGACCAAATTCTTCAGCTGTTTCATATTTGAAACTTGGGTATAATATGGAGTATTTTGGCAATATTTACTCTGATGCACAAATATATGGAGTGAATTTATATGTGTGCCAAGATCTGTGTTCCGGGAACTGTTCCTGCTTGGGAATTTTCCATGACAATTCGTCTGGTTCTTGCTATATGCTTGAAAATGAATTGGGGTCTATCAAGTCAAGCAATACAAGGGCAAGTGACATGTTGGGCTACATTAAAACTATTGTTGTATCTGCCCCCACTTCTGACGATCGTACTTCTCAAAGAAAGGAGTTTCCTCTGGCTGCCCTGGTGCTATTACCTATTACTGGATTCATTCTTTTGATGGCTCTAGGTTTCCTCTGGCGGAGAAGTTTGAAAATCTCCAAGACGAAAGATATAAAATTAGGTAAATTCAACTCACGTTCTTCGGAGGACCTGGAAGCCTTCTACATTCCAGGCTTACCTAAAAGGTTCGATTATGAAGAACTTGAGGAGGCTACTGATAATTTTAAGACTCTAATCGGGTCAGGCGGATTTGGTATTGTATACAAGGGTGTTCTGCCTGATAAGACTGTTGTGGCAGTAAAGAAAATAGTCAATTTGGGCATTCAGGGTAAAAAAGAATTTTGCACCGAGATTGCAATTATTGGAAACGTTCACCATGTTAATTTGGTCAAACTGATAGGCTTTTGTACCCAAGGGAGACAACGTCTGTTAATATATGAGTACATGAATCGTGGCTCCCTGGATCGCACCCTCTTTGGTGGTGGACCAGTGTTAGAGTGGCAAGAGAGGTTTAATATAGCACTTGGAACAGCACGTGGACTTGCCTATCTGCACAGTGGGTGCGAGCAAAAGATCATTCATTGTGATATCAAACCCGAGAATATTCTTTTGCAGGATCACTTTCAAGCTAAGATCTCTGATTTTGGACTCTCGAAACTTCTAAGCCCCGAACAGTCTGGTTTGTTCACAACAATGAGAGGGACTCGTGGTTATCTTGCTCCAGAGTGGCTTACAAACTCCGCGATCTCAGAGAAAACTGATGTTTATAGTTATGGAATGGTAGTGCTAGAATTGGTGAGTGGAAGGAAAAATTGTTCTTTAAGGTCACAAAGCCATAGCGTGGATGAGAGTAACAGTGGTGGTGGGCATTCATCGAGTTCATCAATGACAGGATTGGTATATTTTCCACTATTTGCGTTAGAGATGCATGAGCAAGGTAGATACCTGGAGTTGGCTGACCAAAGGCTAGAAGGGCGTGCTACGAGTGAGGAGGTGGAGAAACTAGTGCGTGTTGCCTTGTGTTGCGTTCATGAAGATCCGGCACTTAGGCCAAACATGGTCACTGTTGTTGGCATGTTGGAAGGTGGGACTCCATTGGCCCACCCAAGGATTGAATCTTTGAACTTCCTGCGCTTTTATGGGCGCAGGTTTACAGAGGCCTCCACGATAGCAGAGGAAAATGAGTATGACCCTACCAAGTATCAACAAGCAAGAAAATCTATAAGTATAACAAGTGCTTCACAAACTGCGTTTTCTTACATTTCATCGCAAAATATCTCAGGGCCAAGATAG 2586 0.4285 MEFLFIFLLFTVVSAYSFSDYINPNFTASHLQFIDNSGTFLSSPNATFHAAIFNPGGQQTKFYLCVIHVSSNTIIWSANRDAPISSSAKMNLTLKGITIVDDAGTLKWSTPSLKSPVYALQLTDMGNLVLLDRSNASLWESFRHPTDTIVIGQQLPVTTLLSSAVSDSDLSTGDYKLRITASDAILEWHGQTYWKLSMATKAFQTSNHMVEYMAINTKGLYLFGSDGTVTVFEVVLPLANFRIAKLAAPGQFAVKSFSGTEWKQEFVGPDDGCQTPFICGRVGLCTDSTTSSTPTCSCPPNFHAGSRNSFGCVPSNGSYSLPFACNSSGYDSRPNSSAVSYLKLGYNMEYFGNIYSDAQIYGVNLYVCQDLCSGNCSCLGIFHDNSSGSCYMLENELGSIKSSNTRASDMLGYIKTIVVSAPTSDDRTSQRKEFPLAALVLLPITGFILLMALGFLWRRSLKISKTKDIKLGKFNSRSSEDLEAFYIPGLPKRFDYEELEEATDNFKTLIGSGGFGIVYKGVLPDKTVVAVKKIVNLGIQGKKEFCTEIAIIGNVHHVNLVKLIGFCTQGRQRLLIYEYMNRGSLDRTLFGGGPVLEWQERFNIALGTARGLAYLHSGCEQKIIHCDIKPENILLQDHFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAISEKTDVYSYGMVVLELVSGRKNCSLRSQSHSVDESNSGGGHSSSSSMTGLVYFPLFALEMHEQGRYLELADQRLEGRATSEEVEKLVRVALCCVHEDPALRPNMVTVVGMLEGGTPLAHPRIESLNFLRFYGRRFTEASTIAEENEYDPTKYQQARKSISITSASQTAFSYISSQNISGPR 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1150 861 Gene3D Transferase(Phosphotransferase) domain 1 580 798 - -
Glsi10g1150 861 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 794 - -
Glsi10g1150 861 SMART blect_4 32 145 IPR001480 -
Glsi10g1150 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Glsi10g1150 861 ProSiteProfiles Protein kinase domain profile. 504 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1150 861 Pfam D-mannose binding lectin 73 157 IPR001480 -
Glsi10g1150 861 Pfam S-locus glycoprotein domain 242 303 IPR000858 GO:0048544
Glsi10g1150 861 Pfam Protein kinase domain 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1150 861 Gene3D - 36 198 - -
Glsi10g1150 861 PIRSF SRK 1 848 IPR024171 GO:0004674
Glsi10g1150 861 SUPERFAMILY Protein kinase-like (PK-like) 481 791 IPR011009 -
Glsi10g1150 861 FunFam Serine/threonine-protein kinase 580 799 - -
Glsi10g1150 861 Gene3D Phosphorylase Kinase; domain 1 477 579 - -
Glsi10g1150 861 ProSiteProfiles Bulb-type lectin domain profile. 25 143 IPR001480 -
Glsi10g1150 861 CDD STKc_IRAK 510 793 - -
Glsi10g1150 861 ProSitePatterns Protein kinases ATP-binding region signature. 510 533 IPR017441 GO:0005524
Glsi10g1150 861 CDD B_lectin 34 145 IPR001480 -
Glsi10g1150 861 SMART serkin_6 504 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1150 861 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 38 143 - -
Glsi10g1150 861 FunFam serine/threonine-protein kinase PBS1-like 473 579 - -
Glsi10g1150 861 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 196 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1150 Glsi-ChrGlsi10 7727724 7730309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1150 401 800 Receptor kinase-like Gene Family AT5G20050 38.756 2.90e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi10g1150 Pkinase 7.7e-51 CL0016