Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1137 ATGAGAGAGGCAATAGCAATGGAGGATTTGCAGAGTGCTCTAAAGGATCGTGATTTAACGGTTTCCACCATCGCAGAGAAGGGTCGCTGTCTCTTAGCTACGAGAGATTTTTACCCAGGAGAGGTAATTATAAGCCAAGAGCCTTATGTATGTGTACCAAATAAATCTTCAGTCGAAACAAGGTGTGATGGATGTTTCACAACAAGTAACCTTAAGAAGTGTTCTGGTTGTCAAGTTGTATGGTATTGTGGCAGCACATGTCAGAAGTCGGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTACTCTCAAAGCTGGACAAGGATAAGAGAAAATCTGTCACACCATCTATTCGATTGATGGTAAAACTTTATCTTCGAAGGAAGTTGCAAAGTGAAAAGATTGTCCCAAGCACTACGACAGACAACTATAACTTGGTCGAGTCATTGGTGGCACACATGTCTGACATCAATGAGGAACAGCTAGTGCTGTACGCACAGATGGCTAATATTGTAAAATTGATGCTACAGTGGCCTGAAATCAACATAAAAGAGATTGCAGAAAATTTTTCCAAGTTTGCCTGCAATGCACATACCATTTGTGACAGTGAACTGAGACCCTTGGGAACTGGATTATATCCTGTCATTTCCATTATCAACCACAGTTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTTAGCTGTAGTACGTGCTGTGCAACAAATACCCAAAGGTTCTGAGGTGCTGATAAGTTATATAGAGACTGCTGGAAGCACTATGACTCGGCAGAAGGCTCTGAAAGAGCAGTACCTATTCACATGCACATGTCCCCGTTGTGTTAAAATGGGTCAGTATGATGATATTCAAGAAAGTGCGATTTTGGAAGGATACAGATGCAAGAACAAAAAATGCAGTGGTTTCCTTCTCCGTACATCTGATGGGAAAGGATTCCAATGCCAAGAATGTGGACTAGTTAGGGACATGGAAGATATAAAGAAGATTGCAACTGAAGCAAAATCTCTATCAGAAGACAAAGCTTCTAAGCTTTGTTCCACTGGCAATTATCAGGAAGCTTTTACCATATACAAGATGATTGAGAAACTCCAAACAGAATTGTACCATCCTTTCTCAATCAGCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGCTTGAACATTGGAGAGAAGCTCTGACGTACTGCAAATTGACCTTACCAGTCTATCAAAGAGTTTATCCACCAGTTCATCCTTTGCTTGGTTTGCAGTATTATACTTGTGGCAAACTTGAATGGTATCTGGGGGACACAGAGGGTGCTGTTGAATCACTTACCAAGGCAGTGGATGTACTAAGAATTACTCATGGCACAACAACACCTTTCATGAAGGACCTCTTGATGAAGTGGGAAGAAGCCCGTGCTGAAGCCTCTTACGAACAGTCCTCTAAAGACGAGTAG 1467 0.4172 MREAIAMEDLQSALKDRDLTVSTIAEKGRCLLATRDFYPGEVIISQEPYVCVPNKSSVETRCDGCFTTSNLKKCSGCQVVWYCGSTCQKSEWKLHRLECEVLSKLDKDKRKSVTPSIRLMVKLYLRRKLQSEKIVPSTTTDNYNLVESLVAHMSDINEEQLVLYAQMANIVKLMLQWPEINIKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRLAVVRAVQQIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCVKMGQYDDIQESAILEGYRCKNKKCSGFLLRTSDGKGFQCQECGLVRDMEDIKKIATEAKSLSEDKASKLCSTGNYQEAFTIYKMIEKLQTELYHPFSISLMQTREKLLKLLMELEHWREALTYCKLTLPVYQRVYPPVHPLLGLQYYTCGKLEWYLGDTEGAVESLTKAVDVLRITHGTTTPFMKDLLMKWEEARAEASYEQSSKDE 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1137 488 Pfam SET domain 28 253 IPR001214 GO:0005515
Glsi10g1137 488 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 21 472 - -
Glsi10g1137 488 Pfam MYND finger 62 99 IPR002893 -
Glsi10g1137 488 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Glsi10g1137 488 SUPERFAMILY SET domain 19 253 IPR046341 -
Glsi10g1137 488 SMART set_7 17 260 IPR001214 GO:0005515
Glsi10g1137 488 ProSiteProfiles SET domain profile. 17 254 IPR001214 GO:0005515
Glsi10g1137 488 Gene3D Tetratricopeptide repeat domain 408 487 IPR011990 GO:0005515
Glsi10g1137 488 SUPERFAMILY TPR-like 346 453 IPR011990 GO:0005515
Glsi10g1137 488 Gene3D SET domain 30 280 IPR046341 -
Glsi10g1137 488 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Glsi10g1137 488 Gene3D - 112 196 - -
Glsi10g1137 488 Gene3D - 61 111 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi10g1137 SET 3.6e-15 No_clan