Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1132 ATGGCGGCTTCCGTCGACAACCGTCAATACGCTGGCCCTTTAAATGGAGTCGTTCGCTCCTTCAACGCCTCTTCCCTCCGTTCCGACTCCCCGATTCTCGGTTTTAACTTCCCTTCCAATACCAAGAGATCCGAACCCTTACCACTGGATTTGGACTCCTCCAGCGAAGATGAAAATGAGGGTGAGGAGTGGAGGGACCTCATACGGAAGGGTAACTCTGAGGTCGAGTCCTCCATCTTCGACCCCCGCGATGACGGAACCGCTGATAACTGGATCGAACGTAACGCCTCCCTTATCCGTCTCACCGGGAAACACCCCTTCAACTCGGAGCCACCACTCACTCAACTCATGCACCACGGCTTCATCACCCCCGTCCCACTCCACTACGTTCGCAACCACGGCACCGTCCCCAAAGCCCGCTGGGAGGACTGGACCATCGAGGTTTGCGGGCTCCTAAAACGGCCCGCCCGCTTCACCATGGACCAACTAGTCAACGACTTCCCGAGCCGCGAGTTTCCGGCGACCTTAGTGTGCGCAGGGAACAGACGCAAGGAACAAAACATGGTGAAACAGAGCATCGGGTTCAACTGGGGGGCAGCTGCTGTTTCCACTTCGGTGTGGCGGGGTGTACCACTGAGGTACTTGCTCCAGCGGTGTGGGATCTACAGCCGGAAGAAAGGGGCACTGCATGTGTGCTTCGAAGGAGCTGAGAATCTGCCAGGTGGCGGTGGGTCCAAGTACGGGACAAGCATCAAGAGAGAGATGGCACTCGATCCATCTCGGGACATCATCCTAGCTTATATGCAAAATGGGGAGCGCTTAGGTCCGGATCACGGGTTCCCTGTGAGGATGATCCTGCCTGGTTTCATTGGGGGCCGCATGGTAAAATGGGTTAAGCGTATCATCGTAACTCCTCAAGAATCGGACAATTATTACCATTACAAAGACAACAGAGTACTTCCCTCCCACGTGGACGCCGAGCTCGCCAACGCCGAAGCTTGGTGGTACAAGCCAGAGTATATCATCAACGAGCTCAACGTAAACTCTGTGATAACAACGCCGTGTCACGAAGAGTTCTTGCCTATAAACTCGTGGACTACACAGATGCCATATGTGTTGAGAGGTTACGCATATTCCGGGGGTGGGAGGAAAGTATCACGTGTGGAGGTAACACTGGACGGTGGAGAAACGTGGCTAGTGGCCAAGTTGGACCATCCGGAGAAACCAAACAAATACGGTAAATACTGGTGCTGGTGTTTCTGGTCCTTGGAAGTGGAGGTGCTGGACCTACTGGGAGCCAAGGAAATTGCAGTGCGCGCCTGGGACGAGGCCTTCAACACCCAGCCTGAGAAGCTCATCTGGAATATCATGGGTATGATGAACAACTCCTGGTTCAGAGTGAAAACCAATGTATGCAAGGCCCATAAGGGGGAGATTGGGATCGTGTTCGAGCACCCGACCCTCCCTGGGAACCAATCTGGTGGATGGATGGCCAAGGAAAGGCACCTTGAGAAGTCATTGGAGTCTAACCAAACCCTCAAGAAGAGTGTCTCAACACCCTTCATGAACACCACCTCAAAAATGTACTCCATCTCTGAAGTGAAAAAGCACAGCAGCCCCGACTCTGCTTGGATAATCGTTCATGGCCACGTCTACGACTGCACCCGCTTCCTCAAGGACCACCCCGGTGGCACCGACAGCATCCTCATCAACGCCGGCACCGACTGCACGGAAGAGTTCGAGGCCATCCATTCCGACAAAGCCAAGAACATGCTTGAGGATTTCCGAATCGGTGAGCTCATGACCACCGGTTACACCTCGGACTCGTCGCCAAATAACTCTGTGCATGGCAATTCCGATACAACACATTTAGCCACCATTAAGGAAGTCTCACCATTACGCGGCGTGGCTCTTAACCCGCGCGAGAAAATCCCATGCAAGCTAGTGTCGAAAACGTCGATCTCCCACGACGTTAGGCTGTTCCGGTTTGCGTTACCCTCTGAGGACCAAGTCATGGGTTTGCCAGTAGGAAAGCACATATTCTTATGTGCTACCATTGACGATAAGCTATGCATGCGAGCTTACACTCCAACCAGCAGCATTGATGAAGCGGGGTATTTCGATTTACTGGTCAAAATTTACTTGAAAGGGGTACACCCAAAGTTCCCCAACGGTGGGCTCATGTCTCAGCACTTGGACTCGCTACCTATTGGCTCTGTGTTGGACGTGAAAGGTCCTTTAGGCCACATAGAGTACACCGGGAGAGGTAACTTTTTGGTTCATGGAAAGAACAAGTTTGCGAAGAAGTTGGCCATGTTGGCTGGTGGGACTGGGATCACACCCATTTACCAAGTGGCCCAAGCGATTCTGAAGGACCCAGAGGACAAGACCGAGATGCACGTGGTATATGCGAACCGAACCGAGGATGATATATTGCTGAGAGAAGAGCTTGATGCGTGGGCTAAGAAGCATGACCGGTTCAAGGTGTGGTACGTAGTACAAGAAAGCATAAAGGAAGGGTGGGAATACAGTGTGGGGTTCATCACGGAGAGTATTCTCAGGGAGCATGTTCCAGAGGCATCGGAGAACACGTTGGCATTGAATTGCGGGCCACCGCCCATGATTCAGTTTGCAGTGCAGCCGAATCTGGAGAAAATGGGATATGACATTAAGAATAATTTGCTTGTGTTTTAG 2694 0.5249 MAASVDNRQYAGPLNGVVRSFNASSLRSDSPILGFNFPSNTKRSEPLPLDLDSSSEDENEGEEWRDLIRKGNSEVESSIFDPRDDGTADNWIERNASLIRLTGKHPFNSEPPLTQLMHHGFITPVPLHYVRNHGTVPKARWEDWTIEVCGLLKRPARFTMDQLVNDFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAVSTSVWRGVPLRYLLQRCGIYSRKKGALHVCFEGAENLPGGGGSKYGTSIKREMALDPSRDIILAYMQNGERLGPDHGFPVRMILPGFIGGRMVKWVKRIIVTPQESDNYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNVNSVITTPCHEEFLPINSWTTQMPYVLRGYAYSGGGRKVSRVEVTLDGGETWLVAKLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEAFNTQPEKLIWNIMGMMNNSWFRVKTNVCKAHKGEIGIVFEHPTLPGNQSGGWMAKERHLEKSLESNQTLKKSVSTPFMNTTSKMYSISEVKKHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAIHSDKAKNMLEDFRIGELMTTGYTSDSSPNNSVHGNSDTTHLATIKEVSPLRGVALNPREKIPCKLVSKTSISHDVRLFRFALPSEDQVMGLPVGKHIFLCATIDDKLCMRAYTPTSSIDEAGYFDLLVKIYLKGVHPKFPNGGLMSQHLDSLPIGSVLDVKGPLGHIEYTGRGNFLVHGKNKFAKKLAMLAGGTGITPIYQVAQAILKDPEDKTEMHVVYANRTEDDILLREELDAWAKKHDRFKVWYVVQESIKEGWEYSVGFITESILREHVPEASENTLALNCGPPPMIQFAVQPNLEKMGYDIKNNLLVF 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1132 897 Gene3D - 344 520 - -
Glsi10g1132 897 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 150 185 IPR022407 GO:0043546
Glsi10g1132 897 Gene3D - 83 334 IPR036374 -
Glsi10g1132 897 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 641 753 IPR017927 GO:0016491
Glsi10g1132 897 FunFam Nitrate reductase 344 520 - -
Glsi10g1132 897 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 557 564 IPR018506 GO:0020037
Glsi10g1132 897 PRINTS Cytochrome B5 signature 551 561 IPR001199 -
Glsi10g1132 897 PRINTS Cytochrome B5 signature 561 575 IPR001199 -
Glsi10g1132 897 PRINTS Cytochrome B5 signature 588 600 IPR001199 -
Glsi10g1132 897 PRINTS Cytochrome B5 signature 576 583 IPR001199 -
Glsi10g1132 897 PANTHER SULFITE REDUCTASE 71 474 - -
Glsi10g1132 897 Pfam Mo-co oxidoreductase dimerisation domain 340 471 IPR005066 GO:0016491|GO:0030151
Glsi10g1132 897 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 740 891 IPR039261 -
Glsi10g1132 897 FunFam Nitrate reductase [NADH] 748 897 - -
Glsi10g1132 897 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 526 601 IPR001199 -
Glsi10g1132 897 SUPERFAMILY Riboflavin synthase domain-like 636 753 IPR017938 -
Glsi10g1132 897 CDD cyt_b5_reduct_like 646 897 - -
Glsi10g1132 897 SMART Cyt_b5_2 529 601 IPR001199 -
Glsi10g1132 897 PRINTS Cytochrome B5 reductase signature 771 790 - -
Glsi10g1132 897 PRINTS Cytochrome B5 reductase signature 865 873 - -
Glsi10g1132 897 PRINTS Cytochrome B5 reductase signature 693 700 - -
Glsi10g1132 897 PRINTS Cytochrome B5 reductase signature 672 683 - -
Glsi10g1132 897 PRINTS Cytochrome B5 reductase signature 738 752 - -
Glsi10g1132 897 PRINTS Cytochrome B5 reductase signature 809 820 - -
Glsi10g1132 897 PIRSF Nitr_rd_NADH 21 896 IPR012137 GO:0006809|GO:0042128|GO:0050464
Glsi10g1132 897 MobiDBLite consensus disorder prediction 27 64 - -
Glsi10g1132 897 FunFam Nitrate reductase 522 603 - -
Glsi10g1132 897 Gene3D - 522 603 IPR036400 -
Glsi10g1132 897 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 82 342 IPR036374 -
Glsi10g1132 897 Pfam Oxidoreductase NAD-binding domain 772 879 IPR001433 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 452 465 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 342 354 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 291 304 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 414 424 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 439 451 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 99 113 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 258 274 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 121 137 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 185 197 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 174 185 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 387 399 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 275 288 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 200 215 IPR008335 GO:0016491
Glsi10g1132 897 PRINTS Eukaryotic molybdopterin domain signature 373 387 IPR008335 GO:0016491
Glsi10g1132 897 Pfam Oxidoreductase molybdopterin binding domain 133 312 IPR000572 -
Glsi10g1132 897 Pfam Oxidoreductase FAD-binding domain 646 752 IPR008333 -
Glsi10g1132 897 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 524 606 IPR036400 -
Glsi10g1132 897 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 771 790 IPR001709 GO:0016491
Glsi10g1132 897 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 797 806 IPR001709 GO:0016491
Glsi10g1132 897 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 841 857 IPR001709 GO:0016491
Glsi10g1132 897 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 809 820 IPR001709 GO:0016491
Glsi10g1132 897 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 560 570 IPR001709 GO:0016491
Glsi10g1132 897 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 693 700 IPR001709 GO:0016491
Glsi10g1132 897 Pfam Cytochrome b5-like Heme/Steroid binding domain 532 600 IPR001199 -
Glsi10g1132 897 CDD eukary_NR_Moco 84 469 - -
Glsi10g1132 897 Gene3D - 748 897 IPR039261 -
Glsi10g1132 897 MobiDBLite consensus disorder prediction 27 48 - -
Glsi10g1132 897 SUPERFAMILY E set domains 344 471 IPR014756 -
Glsi10g1132 897 FunFam Nitrate reductase 85 334 - -
Glsi10g1132 897 Gene3D Translation factors 634 747 - -
Glsi10g1132 897 FunFam NADH-cytochrome b5 reductase 633 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1132 Glsi-ChrGlsi10 7599456 7602983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1132 634 888 NADPH P450 reductases AT5G17770 39.922 1.77e-51 180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1132 10 7599456 7602983 Glsi10g1132 10 7599456 7602983 ECH