Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1129 ATGCGTTTTCAGGGGGAGACGGAGAGTTTGGTAGTGCGCAGAGAGGAAGAGACCAAAACTCCAAAATGGGTCGTTCAGTCTTTAATCCTCTTTTTCCCTTTCCAAACATTCCGAGTTCGCCTCCATTCCTCTTCCCGTATCCCATGGTCAGCTCGGTTTCAGAACCTTAACCCTCAGTGTGTTCTCAGTAGTGAGAAAAGCGCGAGTTCAGATTTCTTTGATTTTCTCAGGCGAAGAAAGCGTAACTCGAACAAGTTTCTAGTTCTTTCTACAGTCAGACCACAATTCCTGATCAAAAGATGTCATAGGTTTAGATGGATTTGGTTCCCTATGCATCATCTACCTCGATTTTTCGGTCGGAGAAAGCAAACGAAGGGCATGGATCCGAATAAAGCCCGAAGAAAACCGACGCTCGATCGCCGCAATGCGGTCAAGTACTCTGAGTATGATGCTGGGTCGTCTTCGTCGTCGCTAGATGATTCGTCTGGATCGCTCTACGCTCGATCAATGGAGTTCAATGATCGATCCAGCTTCCGAATTGACGGAGTTGAGGGCGAGATTGATCGAATATGCAGGGGTTTGGGGCTTACGGGACCAGAAGACTTCGCTATTCCCCCGGCGGCGTGGGAGGCTATGAAGGTTAGATCTTCGTTGGATGATATGCCAAGGTTGAAGTTGAACGATTCGAATATTCAGGACAAGGAAGAACATTTGGGTGCCCAATTTGAAGAGAGGGTTATAATTAGAGGTTTACCTGACTCAACTCAAGATGATCATGCTGAGACTAGTGGGTGCTGCATTTCTGGTGGTGGTGTTTGTGGAGCCGGTATCAAGGGAGTCCGACCGCCGATGCTTAAGCCACCGCCTGGAGTGAGGCTTTCAGTTATTGATAACACTTGCTCCACTTGGGACATTTTAAGGGATTTTGCTCCGCAAGGTGAACGATATTCTTTGGAAGATCACGGGGAGAAAAACTCTTCCGATGATGACGAAGTAATAAGGAGAGAAATGGGGCAAAAAGAAGTACTAAAAGAAGAAGAAGAAGAACGGAAGGTTGACGGTGGGGTAAGTCCGAAGGGAGAAGAGGATGATAACGCAACAATGATTGTGGAAATTGTTGCTGAGCTTTCAACATCGTGTTCGTTTACTACGTCAAACGAAGATGATTCTTCTAGCACTACCACGGATCCTAGGTCTAATAATATATCTCCTAACGGAAGATTCAGCCGTATAATTTCGAACTGGGAAAAGGGTGAGCTTTTGGGACGTGGTTCGTTTGGGTCAGTTTATGAAGGAATTTCTGGAGATGGATATTTTTTTGCTGTAAAAGAAGTTTCACTACTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTCTATCAGTTGGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTATGGCACAGAAATGGATGATTCAAAGCTGTATATCTTTCTTGAGCTTGTAACTAAAGGTTCCCTTGCAAGCCTCTATCGGCAGTATAATCTTCGAGATTCCCAAGTATCTGCCTACACAAGACAGATTCTGCATGGTTTGAAGTATCTTCATAATCGAAATGTGATTCACAGGGATGTTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATATTAAATCATGCAAGGGGACAGCATTCTGGATGGCACCTGAGGTTGTGAAAGGAAAAAATCAAGGTTATGGGCTTCCGGCTGATATATGGAGCCTGGGGTGCACAGTGTTGGAGATGTTAACTGGCCAAATTCCGTACTCTCATTTGGAATATATGCAGGCCTTGTTTAGAATTGGAAAAGGTGAGTGCCCTCCTGTTCCTGATTCTCTTTCAAGAGATGCACGAGATTTTATCCTACAGTGCCTTCAAGTCAATCCAGATGATCGTCCCACTGCTGCTCAACTCTTAAATCATGCATTTGTTCAAAGGCCTCTTTCCACGTCCTCTGCCTCTGCCTCTCCTTATATACCTGATAGAAGTGTTTGA 2067 0.4446 MRFQGETESLVVRREEETKTPKWVVQSLILFFPFQTFRVRLHSSSRIPWSARFQNLNPQCVLSSEKSASSDFFDFLRRRKRNSNKFLVLSTVRPQFLIKRCHRFRWIWFPMHHLPRFFGRRKQTKGMDPNKARRKPTLDRRNAVKYSEYDAGSSSSSLDDSSGSLYARSMEFNDRSSFRIDGVEGEIDRICRGLGLTGPEDFAIPPAAWEAMKVRSSLDDMPRLKLNDSNIQDKEEHLGAQFEERVIIRGLPDSTQDDHAETSGCCISGGGVCGAGIKGVRPPMLKPPPGVRLSVIDNTCSTWDILRDFAPQGERYSLEDHGEKNSSDDDEVIRREMGQKEVLKEEEEERKVDGGVSPKGEEDDNATMIVEIVAELSTSCSFTTSNEDDSSSTTTDPRSNNISPNGRFSRIISNWEKGELLGRGSFGSVYEGISGDGYFFAVKEVSLLDQGSQGKQSVYQLEQEIALLSQFEHENIVQYYGTEMDDSKLYIFLELVTKGSLASLYRQYNLRDSQVSAYTRQILHGLKYLHNRNVIHRDVKCANILVDANGSVKLADFGLAKATKLNDIKSCKGTAFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTGQIPYSHLEYMQALFRIGKGECPPVPDSLSRDARDFILQCLQVNPDDRPTAAQLLNHAFVQRPLSTSSASASPYIPDRSV 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1129 688 MobiDBLite consensus disorder prediction 121 139 - -
Glsi10g1129 688 MobiDBLite consensus disorder prediction 120 139 - -
Glsi10g1129 688 MobiDBLite consensus disorder prediction 343 365 - -
Glsi10g1129 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Glsi10g1129 688 ProSiteProfiles Protein kinase domain profile. 415 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1129 688 Gene3D Transferase(Phosphotransferase) domain 1 412 683 - -
Glsi10g1129 688 SMART serkin_6 415 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1129 688 MobiDBLite consensus disorder prediction 381 405 - -
Glsi10g1129 688 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 290 679 - -
Glsi10g1129 688 Pfam Protein kinase domain 416 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1129 688 SUPERFAMILY Protein kinase-like (PK-like) 393 675 IPR011009 -
Glsi10g1129 688 ProSitePatterns Protein kinases ATP-binding region signature. 421 443 IPR017441 GO:0005524
Glsi10g1129 688 FunFam Mitogen-activated protein kinase 1, putative, expressed 413 681 - -
Glsi10g1129 688 MobiDBLite consensus disorder prediction 314 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1129 Glsi-ChrGlsi10 7576411 7584773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1129 277 672 MAP Kinase Kinase Kinase AT4G08500 59.698 3.07e-151 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi10g1129 Pkinase 2.5e-69 CL0016