Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1125 ATGGGCCTAATCCACAGGGCTGTATATCATACAGTCTCCAATTCCTTGCCTCCGTGGAACTTGGACCGAGAAATGGGTTCGCTAGATACACCGATGAGTGCAGAGAACCGTTCCGCCCCACCAACCGGCAACGGTAAAGTTCCCGCTGCCGATGGGGTTCCCTTACGTTCGACAGAGCCTGTCGAAATGTTGTCGGAGAAGCCGTTGGAATTCGACGCTTCAAAGAAGCGGAGAGCGGGTATGCTTCCCTTGGAGGTTGGCACTCGGGTCATGTGCCGTTGGAGGGATGGAAAATTTCACCCCGTGAAAGTCATTGAACGGCGCAAGGTGCAAATGGGAGGTCCCAATGATTACGAGTATTACGTCCATTATACTGAATTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGAACAACTTGATCTTGATTCGGTGGAGGCTGTTGTTGATGAGAAAGTGGAGGATAAGGTGACAAGCTTGAAGATGACACGCCACCAAAAGAGGAAGATCGATGAGACACATGTAGAGGGCCATGAGGAGCTTGATGCTGCTAGCTTGCGAGAACATGAAGAATTTACTAAAGTGAAAAATATAGCTACTATTGAACTGGGAAGATACGAGATTGAGACATGGTACTTCTCCCCCTTCCCACCAGAATACAATGAATGTTTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGTGATCTTAAGCATCCTCCTGGTGATGAGATATACAGAAGTGGTACACTGTCAATGTTTGAGGTTGATGGCAAAAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTGGCTAAGTTGTTTCTTGATCACAAGACCCTTTATTATGATGTAGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGATGCCACATGGTTGGCTATTTCTCCAAGGAAAAACATTCTGAAGAATCTTATAATTTGGCATGTATTCTCACCCTTCCACCCTACCAAAGAAAAGGCTATGGCAAATTTTTAATTGCTTTCTCATATGAACTTTCCAAGAAGGAGGGCAAAGTTGGCACGCCTGAAAGGCCTCTTTCAGACCTCGGGTTGCTGAGCTACAGAGGATACTGGACCAGGGTTCTTTTAGACATTTTGAAAAAGCACAAGGCAAATATTTCTATTAAGGAGCTGAGTGACATGACAGCAATTAAAGCAGAAGATATATTGACCACCCTTCAGAGCCTAGAATTGATTCAATACAGGAAAGGACAGCATGTTATTTGTGCGGATCCGAAGGTTCTGGATCGCCATCTTAAAGCTGCTGGCAGAGGGGGTCTGGACGTTGATGTTAGCAAGTTGATCTGGACTCCTTATAAAGAACAAGGTTGA 1410 0.4468 MGLIHRAVYHTVSNSLPPWNLDREMGSLDTPMSAENRSAPPTGNGKVPAADGVPLRSTEPVEMLSEKPLEFDASKKRRAGMLPLEVGTRVMCRWRDGKFHPVKVIERRKVQMGGPNDYEYYVHYTEFNRRLDEWVKLEQLDLDSVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNECLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKANISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1125 469 FunFam Histone acetyltransferase 74 193 - -
Glsi10g1125 469 Gene3D - 194 250 - -
Glsi10g1125 469 SMART chromo_7 98 157 IPR000953 -
Glsi10g1125 469 Pfam MOZ/SAS family 254 431 IPR002717 GO:0004402|GO:0006355|GO:0016573
Glsi10g1125 469 CDD NAT_SF 305 363 - -
Glsi10g1125 469 MobiDBLite consensus disorder prediction 23 53 - -
Glsi10g1125 469 Pfam MYST family zinc finger domain 195 249 IPR040706 -
Glsi10g1125 469 FunFam Histone acetyltransferase 372 451 - -
Glsi10g1125 469 Gene3D - 73 193 - -
Glsi10g1125 469 PANTHER HISTONE ACETYLTRANSFERASE 91 465 - -
Glsi10g1125 469 Pfam RNA binding activity-knot of a chromodomain 84 142 IPR025995 -
Glsi10g1125 469 FunFam Histone acetyltransferase 252 380 - -
Glsi10g1125 469 FunFam Histone acetyltransferase 192 249 - -
Glsi10g1125 469 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 194 465 IPR016181 -
Glsi10g1125 469 SUPERFAMILY Chromo domain-like 76 194 IPR016197 -
Glsi10g1125 469 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 193 464 IPR002717 GO:0004402|GO:0006355|GO:0016573
Glsi10g1125 469 Gene3D - 372 452 IPR036388 -
Glsi10g1125 469 Gene3D - 252 464 - -
Glsi10g1125 469 CDD CBD_MOF_like 87 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1125 Glsi-ChrGlsi10 7544876 7552375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1125 28 469 C2H2 Transcription Factor Family AT5G64610 86.199 0.0 793