Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1101 ATGTCGTCGTCGAATTCTCCGTGCGCCGCTTGCAAGATTCAGAGGCGGAAATGTACCCAAGACTGTGTGTTTGCGCCGTATTTCCCGCCGGATAACCCTCAGCGGTTTGCTTATGTCCACAAGGTGTTTGGCGCAAGCAATGTCGCTAAGATTCTCAACGACCTCAACGCCGCCCAGCACGAAGACGCCATCAAATCTTTGGCTTACGAAGCTGAGGCCCGCCTCCGGGATCCAGTCTACGGTTGCGTCGGTCTTATCTCCGTCCTCCAACACAGACTCAAGGAGTTGCAAGCCGAAGTCCACAGTGCCAAGAAAGAGCTCGCTACCTATATTGGACCTCATGCCGCGCTTCCTATCTTCCAACCTCCCGGGGCAGGGGCGATCACACAGCATCACACCCGCAACCCCCCTTCGTTGTCCGTTTTACCCCCCATCAACATTCCGCCGATGATGTGGATTCCAACGCACGGGGAACAATTGGTGATTCATAGCCCTCAGCAGCAGCAGATCTTTGAAGCTCAGGCTCAGCAATTTGCTGCCTCCGTGGCCACGAGAGAGCAACAGGAGATGATGCAGCAAGTGCTTATGAGACTTAATGATGGGTACGACGGGCCTTCAGCTTCTGGAAGTAGGTTCAACCGGATTTCTTCTTCTGCTGCGATGTCGCCTTCATTGGTACTAAGCCCCGTCAGTACTCATCCTTGTCACATTAATCAAACTCAGCAACCACATCAGCAACATCATCCTCTCTACCATCAGCTCCAGGGGCAGCTAATGCTCACAACGCAGCAACCAAAACCACAGCAATCGACGCTATCCCATAGGCAACGCAACTCGGAATGTGAAGTGGTTCTTGCCAGTCGGAGGAAAATGGATATGAAGAAGGAGAGAGACACTCATTCGCACAAAGAGGAAGGGAGAAGGAGGAGGGTATTCAAGACTGAATGA 948 0.5264 MSSSNSPCAACKIQRRKCTQDCVFAPYFPPDNPQRFAYVHKVFGASNVAKILNDLNAAQHEDAIKSLAYEAEARLRDPVYGCVGLISVLQHRLKELQAEVHSAKKELATYIGPHAALPIFQPPGAGAITQHHTRNPPSLSVLPPINIPPMMWIPTHGEQLVIHSPQQQQIFEAQAQQFAASVATREQQEMMQQVLMRLNDGYDGPSASGSRFNRISSSAAMSPSLVLSPVSTHPCHINQTQQPHQQHHPLYHQLQGQLMLTTQQPKPQQSTLSHRQRNSECEVVLASRRKMDMKKERDTHSHKEEGRRRRVFKTE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1101 315 MobiDBLite consensus disorder prediction 262 315 - -
Glsi10g1101 315 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 238 - -
Glsi10g1101 315 MobiDBLite consensus disorder prediction 281 315 - -
Glsi10g1101 315 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Glsi10g1101 315 Coils Coil 86 106 - -
Glsi10g1101 315 MobiDBLite consensus disorder prediction 262 280 - -
Glsi10g1101 315 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1101 Glsi-ChrGlsi10 7388455 7390150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1101 1 238 AS2 family AT5G66870 44.891 9.91e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi10g1101 LOB 3.9e-41 No_clan