Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1099 ATGACAGAGCAGGGTCACCTACATCTTGAGGACACTGGTCAGACAGAGAGGTCCCAGTGGGTGCTTCATTCTCCCAATCCACCATCTCTATGGAATAAGCTGTTTAATTCAGTCAAGGAGACTGTCTTGCCTCATGGGAACCAGAAAATCTTTCATAGACATGCTGTTTCGCTCTTGCAGAATTTATTCCCAATCCTTACTTGGGTAAAAGATTACAAAGCCTCCAAGTTTAAAGATGATTTGTTAGCTGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGCATAGGATATGCTAATTTAGCTAGACTTGATCCTCAATATGGCCTGTATACCAGTGTTGTTCCTCCTCTTATCTATGCTCTAATGGGGAGCTCAAGAGAAATTGCAGTTGGACCTGTAGCTGTAGTTTCATTGCTGCTATCCTCCCTGGTTCCGCAAGTGGAAGATCCTGTTGCTAACCCTGATGCCTACAGAAATCTGGTCTTTACCGTGACTTTCTTTGCTGGAATCTTTCAAACTACATTTGGAATTTTTAGGCTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCTTAGTTGGATTCATGGCAGGTGCAGCTATCATGATTGGCCTCCAACAACTCAAGGGATTGCTGGGGATTACTCACTTCACTACCAAAACTGATATAGTATCTGTTTTGGAGTCTGTTTATAAGTCACTCCGTCTTCAAGTTACTTCTGCAGAAAAATGGTACCCTCTGAATTTTGTCCTCGGGTGTTCCTTCCTTATTTTCCTTCTGATTACCCGGTTTATAGGCAGAAGAAACAGAAAGCTTTTCTGGTTGCCTGCTATTTCTCCTCTTCTATCGGTTATACTATCCACTTTAATTGTATATTTGACAAAAGCTGATAAGCATGGGGTTAATATAATAAAGCGCGTCAAAGGAGGCCTGAATCCCAGTTCAGCTCACCAATTACAATTCCATGGTCAACATGTTGGACAAGCAGCTAAAATTGGATTAATTTCTGCCGTCATCGCTCTCACTGAAGCAATAGCTGTAGGTCGATCTTTTGCTTCCATTAAAGGATACCATCTTGATGGGAACAAAGAGATGTTAGCAATGGGGTTCATGAACATTGCAGGATCTTTAACTTCATGCTATGTGGCAACAGGATCTTTCTCAAGGACTGCAGTAAACTTCAGTGCAGGGTGTCAAACAGCAGTATCAAACATTGTGATGGCGGCCACTGTGTTTGTGTCACTGGAATTATTTACGAGGCTCTTATACTACACTCCAGTGGCTATACTTGCTTCTATCATTCTCTCTGCACTTCCGGGACTTATTGACATAAGTGAAGCTTGCTATATCTGGAAGGTTGATAAGTTAGACTTTCTGGCCTGTATTGGTGCTTTCCTTGGCGTCTTGTTTGCGTCAGTGGAGATTGGTCTTCTCGTTGCAGTAACAATCTCATTCGCAAAGATACTGATACCATCAATTCGACCAGGGATAGAAGTTCTTGGAAGAGTTCCAAGAACAGAAGCTTTTTGTGATGTTTCTCAATATCCCATGGCCATAAGCCCTCCTGGCATCTTGGTTATCCGCATAAGCTCCGGCTCGCTTTGCTTCGCAAATGCCAACTTCGTCAGAGAAAGGATACTGAAATGGGTGACAAAAGAAGATGATGGCCTCAAAGAAAGTGGCCAAGCGGTGATCCTGGACATGACCAACCTGATGAATGTGGATACTTCGGGAATTATTGCACTGGAAGAACTGCACAAGAGGTTGCTTTCCCGTGGTGTACAATTAGCTATGGTGAACCCAAGGTGGCTAGTAATTCACAAGCTTAAACTTGCACACTTTGTGGATAAAATCGGGAAAGAATGGGTTTTCCTTACTGTCGGGGAAGCCGTGGACGCATGCCTCTCTTCTAAATTGCTACCCCATCAGCACGTACCTTAG 1944 0.4336 MTEQGHLHLEDTGQTERSQWVLHSPNPPSLWNKLFNSVKETVLPHGNQKIFHRHAVSLLQNLFPILTWVKDYKASKFKDDLLAGLTLASLSIPQSIGYANLARLDPQYGLYTSVVPPLIYALMGSSREIAVGPVAVVSLLLSSLVPQVEDPVANPDAYRNLVFTVTFFAGIFQTTFGIFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGITHFTTKTDIVSVLESVYKSLRLQVTSAEKWYPLNFVLGCSFLIFLLITRFIGRRNRKLFWLPAISPLLSVILSTLIVYLTKADKHGVNIIKRVKGGLNPSSAHQLQFHGQHVGQAAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAATVFVSLELFTRLLYYTPVAILASIILSALPGLIDISEACYIWKVDKLDFLACIGAFLGVLFASVEIGLLVAVTISFAKILIPSIRPGIEVLGRVPRTEAFCDVSQYPMAISPPGILVIRISSGSLCFANANFVRERILKWVTKEDDGLKESGQAVILDMTNLMNVDTSGIIALEELHKRLLSRGVQLAMVNPRWLVIHKLKLAHFVDKIGKEWVFLTVGEAVDACLSSKLLPHQHVP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1099 647 Gene3D STAS domain 495 638 IPR036513 -
Glsi10g1099 647 CDD STAS_SulP_like_sulfate_transporter 516 628 - -
Glsi10g1099 647 Pfam STAS domain 516 631 IPR002645 -
Glsi10g1099 647 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Glsi10g1099 647 Pfam Sulfate permease family 77 463 IPR011547 GO:0016020
Glsi10g1099 647 ProSiteProfiles STAS domain profile. 532 635 IPR002645 -
Glsi10g1099 647 FunFam Sulfate transporter 31 495 638 - -
Glsi10g1099 647 SUPERFAMILY SpoIIaa-like 522 635 IPR036513 -
Glsi10g1099 647 PANTHER SULFATE TRANSPORTER 43 636 IPR001902 GO:0016020|GO:0055085
Glsi10g1099 647 NCBIfam sulfate permease 64 631 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1099 Glsi-ChrGlsi10 7372629 7375684 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1099 14 640 Inorganic Solute Cotransporters AT5G10180 64.632 0.0 842