Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1097 ATGGAACATTCAGCTGATGAAAATCTTGAAACAGAAGAGATGCATGGTCAGGCACCACACGTCCACAGAGTGGGAATTCCTCCTAGACAGAACCTCTTCAAGGAATTCCAAGCCACCGTAAAAGAAACATTATTTCCTGATGATCCTCTCCGCTTCTTCAAAGATCAGCCTAAATCCCGGAAGTTCATCCTTGGCATTGAGGCCATATTCCCCATACTTAATTGGGCAAGAAGTTATAATCTTGTTAAATTTAGAGGGGATCTTATAGCTGGTCTGACTATTGCAAGTCTCTGCATCCCTCAGGATATTGGATACGCAAATCTTGCAAATTTGGCTCCACAGTACGGACTGTACTCCAGCTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGATATTGCAATTGGACCAGTAGCTGTGGTTTCTCTCTTGTTAGGGACCTTACTTCAGAAGGAGATTGATTACGTTGCGCACGCAGCAGAGTATCAGCGACTTGCTTTTACAGCCACATTTTTTGCAGGGATTACCCAAGCAACTCTTGGGATTTTTAGGTTAGGTTTCTTGATTGACTTCCTATCCCATGCTGCTATTGTTGGTTTCATGGGGGGTGCTGCCATCACAATTGCCCTTCAACAGCTTAAAGGTTTCCTTGGCATTAAGAAGTTCACAAAGAAAACTGACGTTGTCTCTGTGATGCATTCAGTAGTCTCATCAGCCCATCATGGGTGGAACTGGCAGACTACAGTCATTGGAGCAAGCTTTTTAGGTTTTCTTTTGTTTGCTAAATATATTGGAAAGAAGGACAGGAAATTCTTCTGGGTACCAGCAATTGCCCCATTGATATCCGTTGTGCTGTCCACTTTTCTAGTGTACATAACCCGTGCAGACAAGCAAGGTGTTGAAATTGTAAGACACATAGAAAAAGGGATCAATCCTTCATCTGTTAATGAAATATACTTTAGTGGTGATTACCTGGGGAAGGGTTTCAAAATTGGCGTCGTGGCTGGTATGATAGCATTAACTGAAGCCACAGCAATTGGAAGAACATTTGCTTCCATGAAGGACTATCAATTGGATGGAAACAAAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTGGCAACAGGCTCTTTCTCTCGGTCAGCTGTAAACTTCATGGCTGGCTGCCAAACTGCGGCTTCTAATATTGTGATGTCGGTCGTTGTGTTCTTAACCCTGCAATTCATCACACCTGTTTTTAAGTACACTCCAAATGCCATTCTTTCTGCCATCATCATTTCTGCTGTTATCAACCTTGTCGACTATCAGGCAGCTGTTTTGATATGGAAGATTGATAAATTTGATTTCGTTGCTTGCATGGGAGCCTTTTTTGGTGTTGTTTTTGCCACGGTTGAGAAAGGACTTCTAATTTCTGTCTCTATATCCTTTGCTAAAATCCTACTACAAGTCACAAGGCCACGAACTGCTATTCTGGGGAAAATTCCTAGGACAACTGTCTATCGAAATATTCAACAATACCCAGAAGCTACGAAAGTTTCTGGTGTTTTGATTGTAAGAGTTGATTCTGCAGTATATTTTTCCAACTCTAATTATGTTAAAGAAAGGATCTTGAGATGGCTGATGGATGAGGAAGAACGAGTTAAAGGAGACTACCAAACAAGAATACAATTTTTGATAGTGGAGATGTCGCCCGTTACTGACATCGATACCAGTGGCATCCATGCCTTGGAAGAGTTGTATAGAAGTCTCGAGAAGAAAGATGTTCAGCTTGTTCTGGCAAATCCCGGCCCCGCAGTGACACAAAAGCTTCACACATCCAATTTTGCAAATCTGATTGGTGAGGACAAGATCTTCCTCACAGTTGCAGATGCTGTTGCATACTGTGCTCCAAAGCTGGCTGAGGAACCTTAA 1944 0.4234 MEHSADENLETEEMHGQAPHVHRVGIPPRQNLFKEFQATVKETLFPDDPLRFFKDQPKSRKFILGIEAIFPILNWARSYNLVKFRGDLIAGLTIASLCIPQDIGYANLANLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQKEIDYVAHAAEYQRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDVVSVMHSVVSSAHHGWNWQTTVIGASFLGFLLFAKYIGKKDRKFFWVPAIAPLISVVLSTFLVYITRADKQGVEIVRHIEKGINPSSVNEIYFSGDYLGKGFKIGVVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAASNIVMSVVVFLTLQFITPVFKYTPNAILSAIIISAVINLVDYQAAVLIWKIDKFDFVACMGAFFGVVFATVEKGLLISVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATKVSGVLIVRVDSAVYFSNSNYVKERILRWLMDEEERVKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELYRSLEKKDVQLVLANPGPAVTQKLHTSNFANLIGEDKIFLTVADAVAYCAPKLAEEP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1097 647 ProSiteProfiles STAS domain profile. 516 639 IPR002645 -
Glsi10g1097 647 PANTHER SULFATE TRANSPORTER 30 639 IPR001902 GO:0016020|GO:0055085
Glsi10g1097 647 NCBIfam sulfate permease 71 635 IPR001902 GO:0016020|GO:0055085
Glsi10g1097 647 SUPERFAMILY SpoIIaa-like 518 639 IPR036513 -
Glsi10g1097 647 Gene3D STAS domain 496 642 IPR036513 -
Glsi10g1097 647 CDD STAS_SulP_like_sulfate_transporter 517 632 - -
Glsi10g1097 647 FunFam Sulfate transporter 31 496 642 - -
Glsi10g1097 647 Pfam STAS domain 517 635 IPR002645 -
Glsi10g1097 647 MobiDBLite consensus disorder prediction 1 19 - -
Glsi10g1097 647 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Glsi10g1097 647 MobiDBLite consensus disorder prediction 1 24 - -
Glsi10g1097 647 Pfam Sulfate permease family 84 464 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1097 Glsi-ChrGlsi10 7353989 7357847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1097 3 646 Inorganic Solute Cotransporters AT1G22150 74.308 0.0 982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1097 10 7353989 7357847 Glsi08g1225 08 8882024 8884971 CCT