Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1085 ATGGCTCCCCAAATGTTCAAGGGCCTTATCTCGCAGTTTCTGAAAAACCCTTCACATGCCCATCGACTCCCGGGCACCTATTCAATTTCCCTCTTCTCCTCCACCTCCTCCAAACACACTAGTTCAAATTCTTCTATTAAAATGTTTGATTACTTGCTCAAGGAACACAATTTCTCCTTAGAGGCTGCTAAGAGAGCCTCATCAACGGTTACGCATGTGAAAAACCCCGAACAGGCAGATTCTATACTGTCATTCTTTAAGCAAATTGGTTTCTCGAATACTCACATTGAAGATGTTGTCGAAAGATTTCCAAAAATTCTCCATGCCAGCCTTGACAACATCATTAGACCAAAAATCATTTTTTTCCAGGACATAGGCTTCACCCCTGCTGATATGGCTGATTTTCTATCTTCTGATCCGTGGCTTCTCACGAGGAGCGCCAATAATCGACTTGGCCCATCGTTTACGGTGTTGAAGAATGTATTAGGTTCAAATGCTGAAGTTTGTAGGCTCTTAAAGCTATCTGGTTGGTATTTGAAACATGATTTGGAGAGGACTTTGTTGCCTAATATTGAATACTTGAAAAGTATTGGAATAAGCTCTTCACAGATTGTTAGATACATCTTCAATTTCCCTAGATTTTTTCTGCTTAAACCAGAGAGCATTCCGGTATTCGTTAGTAGAGTCGATAAAATGGGCTTTAATCGGAAATCCAATATGTATCTACCTGCCATACGTGTAATTAGTTCAATGTCTGTGGAGAATTGGCATTTGAAACTGAAGCTGTTCCAGAGCTTGGGATTTTCTGAAAATGATATTTTGGTTGTCTTTAGGAGGTTGCCCCAGGCGTTTGCCGTATCCACGAAGAAAATTCAGGAGGTGACAGAGCTGCTCCTTAGTGTAGGGAAGAGCGATATGTCATATATTGTTAAGCACCCAGAGTTGCTTTTATGCAGTGTTGAGCGCAGGTTAAAACCTCGGCTACAAGTTATAGATGTCTTGCAAAAGAAGAAATTACTTCAGGAAAGACCCTCTTTGACTTCGATCCTTAAAATCACTGATAAACAGTTTTTAAGGAGGTTTGTGTCACCTCATTCAGTACAAGAGCTAAACGTGACTATTGGGAGGTCACGGGCAATCAAATAA 1146 0.4075 MAPQMFKGLISQFLKNPSHAHRLPGTYSISLFSSTSSKHTSSNSSIKMFDYLLKEHNFSLEAAKRASSTVTHVKNPEQADSILSFFKQIGFSNTHIEDVVERFPKILHASLDNIIRPKIIFFQDIGFTPADMADFLSSDPWLLTRSANNRLGPSFTVLKNVLGSNAEVCRLLKLSGWYLKHDLERTLLPNIEYLKSIGISSSQIVRYIFNFPRFFLLKPESIPVFVSRVDKMGFNRKSNMYLPAIRVISSMSVENWHLKLKLFQSLGFSENDILVVFRRLPQAFAVSTKKIQEVTELLLSVGKSDMSYIVKHPELLLCSVERRLKPRLQVIDVLQKKKLLQERPSLTSILKITDKQFLRRFVSPHSVQELNVTIGRSRAIK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1085 381 Pfam mTERF 148 358 IPR003690 GO:0003690|GO:0006355
Glsi10g1085 381 Pfam mTERF 83 299 IPR003690 GO:0003690|GO:0006355
Glsi10g1085 381 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Glsi10g1085 381 SMART mt_12 239 269 IPR003690 GO:0003690|GO:0006355
Glsi10g1085 381 SMART mt_12 274 304 IPR003690 GO:0003690|GO:0006355
Glsi10g1085 381 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Glsi10g1085 381 SMART mt_12 133 165 IPR003690 GO:0003690|GO:0006355
Glsi10g1085 381 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Glsi10g1085 381 FunFam Mitochondrial transcription termination factor-like 147 368 - -
Glsi10g1085 381 Gene3D Transcription termination factor 3, mitochondrial 148 372 IPR038538 -
Glsi10g1085 381 PANTHER CGI-12 PROTEIN-RELATED 44 366 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1085 Glsi-ChrGlsi10 7277806 7278951 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi10g1085 mTERF 1.9e-26 No_clan