Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1084 ATGACAAACCAGAATGTGGTAGCTCCTGATGTCAAATCACGTGTTAACTCCCTTATTGCGGCGGCCATGTGGATTTCGAACTCAACTACGTTGTACGGCACAGCAGTGCCGGAATCTCTGGCAGTGCTTGGTGGGTTTCTGGGCATATCCCGGAAAAAGCTTATGAAAAGGCTTGAGGATGGAGGAGGAGCTAAAGTTAACGCCTGGATTGATTCAATGAGAGCTTCCTCTCCAACCAGACTCAAATCCCACATCCCTACTTCTGAAAACCAAGACACGAGTTCTTGGATTCTTAATCATCCTTCAGCGCTCAACATGTTTGATCAGATAATATATAAATCAAAAGGAAAAAAGATTGTGGCCTTTCTCGACTACGATGGAACTCTCTCCCCAATTGTTGCAGACCCAGATAAAGCATTCATGACTAAAAAGATGAGGGCAACGGTAAAGGACATAGCTAGACATTTTCCCACAGCCATCGTGAGCGGGAGGTGCATAGACAAGGTATATAACTTTGTAAGATTGGCAGAGCTGTACTACGCAGGTAGCCATGGCATGGACATCAAGGGGCCAACGAAAACCCGAAGTTCTGAGAAAGGTAATCAAGCAATTCTCTTCCAGCCTGCAAGTCAATTCTTGCCCATGATCGATGAGGTATACAAAATCTTGTTAGAGACAACAAAGTCTGTGCCAGGGGCTAAGGTAGAGAATAACAAGTTTTGCTTGTCCGTCCACTTCCGTTGTGTTGACGAAAAGAGTTGGACGGCACTGGCAGAGCAAGTTAGATTAGTGCTGAATAAGTACCCGAAACTTAGACTGAGCCAAGGGAGAAAAGTGCTAGAGATCCGTCCAACCATCAAATGGGACAAGGGCAAAGCGCTTGAATTCTTGTTAGAGTCCCTAGGATATGCAAATTCTAATGAAGTATTTCCGATTTATATTGGTGATGATCGAACTGACGAGGATGCTTTTAAGGTTTTAAGCAGTAGAGGTCAGGGAATTGGGATTCTAGTTTCTAGAGTTCCCAAAGAAACAGAGGCCTCCTACACTTTGCGAGATCCATCAGAGGTTGAGCAGTTTTTGCGGCGTTTGGTGGAGTGGAAAAGAATGAGGGTCACTCCAAAAACTGCAGAGAATTGTAGATTGTAG 1149 0.4465 MTNQNVVAPDVKSRVNSLIAAAMWISNSTTLYGTAVPESLAVLGGFLGISRKKLMKRLEDGGGAKVNAWIDSMRASSPTRLKSHIPTSENQDTSSWILNHPSALNMFDQIIYKSKGKKIVAFLDYDGTLSPIVADPDKAFMTKKMRATVKDIARHFPTAIVSGRCIDKVYNFVRLAELYYAGSHGMDIKGPTKTRSSEKGNQAILFQPASQFLPMIDEVYKILLETTKSVPGAKVENNKFCLSVHFRCVDEKSWTALAEQVRLVLNKYPKLRLSQGRKVLEIRPTIKWDKGKALEFLLESLGYANSNEVFPIYIGDDRTDEDAFKVLSSRGQGIGILVSRVPKETEASYTLRDPSEVEQFLRRLVEWKRMRVTPKTAENCRL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1084 382 FunFam Trehalose 6-phosphate phosphatase 119 205 - -
Glsi10g1084 382 FunFam Trehalose 6-phosphate phosphatase 209 285 - -
Glsi10g1084 382 Pfam Trehalose-phosphatase 122 355 IPR003337 GO:0003824|GO:0005992
Glsi10g1084 382 Gene3D - 119 204 IPR023214 -
Glsi10g1084 382 Gene3D - 209 378 IPR023214 -
Glsi10g1084 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 47 371 IPR044651 GO:0004805|GO:0005992
Glsi10g1084 382 CDD HAD_TPP 122 357 - -
Glsi10g1084 382 SUPERFAMILY HAD-like 122 368 IPR036412 -
Glsi10g1084 382 FunFam Trehalose 6-phosphate phosphatase 215 373 - -
Glsi10g1084 382 NCBIfam HAD-IIB family hydrolase 121 328 IPR006379 -
Glsi10g1084 382 NCBIfam trehalose-phosphatase 117 365 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1084 Glsi-ChrGlsi10 7269477 7271515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1084 111 364 Trehalose Biosynthesis Gene Families AT1G70290 26.838 6.11e-10 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1084 10 7269477 7271515 Glsi08g1242 08 9005958 9007993 CCT