Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1049 ATGGCGACCGCTCCCTCGCCTCGCGAAGAGTACGTCTACATGGCGAAGCTTGCCGAGCAAGCCGAGCGCTATGAAGAGATGGTCGACTTCATGGAGAAGGTCTCCGCCGCCGTGGAGAACGAGGAGCTTACAGTAGAAGAGAGGAACCTTCTCTCTGTCGCCTACAAGAACGTTATCGGTGCCCGCCGTGCATCCTGGCGCATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGCAACGAGGATCATGTCTCCATGATCCGGGACTACCGATCCAAGATCGAGACTGAGCTCTCCAACATCTGCGATGGGATCCTTAAGCTCCTCGATACGCGCCTCATTCCTTCCGCTTCTGCTGGTGATTCCAAGGTCTTTTACCTCAAGATGAAGGGTGATTACCATAGGTACCTTGCCGAGTTCAAGACTGGAGCTGAGCGCAAGGAGGCTGCCGAGAGCACTCTCACCGCCTACAAATCTGCTCAGGACATTGCAAATACCGAACTGCCACCAACTCATCCAATTAGGCTTGGTCTAGCTTTGAACTTTTCTGTGTTCTACTATGAGATTCTCAACTCTCCCGACCGCGCATGCAACCTTGCAAAACAGGCTTTTGATGAAGCAATTGCTGAATTGGATACATTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTCACACTCTGGACCTCTGACATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCAGCTCCTAAACGTGATGATGAACAGCAGTAA 786 0.5115 MATAPSPREEYVYMAKLAEQAERYEEMVDFMEKVSAAVENEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSMIRDYRSKIETELSNICDGILKLLDTRLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKRDDEQQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1049 261 Coils Coil 14 41 - -
Glsi10g1049 261 PIRSF 14-3-3 2 250 IPR000308 -
Glsi10g1049 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Glsi10g1049 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Glsi10g1049 261 FunFam 14-3-3 protein epsilon 4 251 - -
Glsi10g1049 261 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Glsi10g1049 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Glsi10g1049 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Glsi10g1049 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Glsi10g1049 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Glsi10g1049 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Glsi10g1049 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Glsi10g1049 261 Gene3D - 2 251 IPR036815 -
Glsi10g1049 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Glsi10g1049 261 SMART 1433_4 8 251 IPR023410 -
Glsi10g1049 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1049 Glsi-ChrGlsi10 6979849 6981665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1049 6 261 14-3-3 family AT1G78300 89.883 8.29e-172 472