Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1047 ATGGCAAGCAGAAGCAGTACCCAAGAAAATAGTGGCAAGCCACTCAGATGCAAAGCTGCAATCTGCGGAAGAGCAGGGGAACCTCTTGTTATAGAGGAAATTGTGGTTGATCCACCAAAAGCTTGGGAGGTTCGGATCAAGATACTCTGTACATCCCTCTGTCACTCTGATGTAACCATCTGGAAAATGAATGCATTAGCTATTGCTTGTGTTGATTTGGTTGTATGGTTTGGGTACAGAGTAGTGGAGAGCGTGGGGGAGCATGTAGAAGAAGTTAAAGAGGGGGACTTGGTAGTGCCGGTGTTTCTTTCAAATTGTGGGGATTGCAGAGATTGCAAAAGCCCCAAAAGCAACATGTGCTCGCTATTCGGAAAACACTTGTTCAATGACATGCCCAGAGACGGAAGCAGCAGATTTAGGGACATGAAAGGAGAGGTGGTGCACCATTTTTTCAATGTTTCCAGCTTCTCTCAGTACACGGTGGTAGATGTCACCAATGTGGTCAAAATTAGCCATCAACTTCCCCTCAACAAGGCTTGCTTGCTTAGCTGCGGAGTGTCGACAGGAGTGGGAGCTGCATGGAAGGTGGCAGACGTGGAAGAAGGCTCGTCTGTGGCTATCTTCGGCCTTGGAGCGGTGGGCCTAGCGGTTGCTGCAGGAGCAAAGCAACGAGGAGCGTCAAAGATCATAGGCGTTGATTTAAATCCTCAAAAATTTGAAATAGGGAAAAAATTTGGGGTCACTGATTTTGTGAATGCCGACATGTGCAAGGAGAAGTCGGTGAGCGAGGGTTGGGGGAAAACGGTGATACTGGGGGTGGAAATGCATGGTTCGCCATTGACACTGAATCCTTATCACATAATGAATGGCAGAAGTATTATGGCGTCACTATTTGGAGGTCTCAAACCAAAAGTGGATGTCCCCTTCATTGCTGAGAAGTACTTGGACAAAGAGCTAAGCTTGGACGACTTCATATCGCATCAGGTGGGTTTCCATGATATAAACAAAGCTTTTGACTATCTTCGGCAAGGAAAGAGTCTTCGATGCATCATATGGATGGATAGTTAG 1068 0.4672 MASRSSTQENSGKPLRCKAAICGRAGEPLVIEEIVVDPPKAWEVRIKILCTSLCHSDVTIWKMNALAIACVDLVVWFGYRVVESVGEHVEEVKEGDLVVPVFLSNCGDCRDCKSPKSNMCSLFGKHLFNDMPRDGSSRFRDMKGEVVHHFFNVSSFSQYTVVDVTNVVKISHQLPLNKACLLSCGVSTGVGAAWKVADVEEGSSVAIFGLGAVGLAVAAGAKQRGASKIIGVDLNPQKFEIGKKFGVTDFVNADMCKEKSVSEGWGKTVILGVEMHGSPLTLNPYHIMNGRSIMASLFGGLKPKVDVPFIAEKYLDKELSLDDFISHQVGFHDINKAFDYLRQGKSLRCIIWMDS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1047 355 Gene3D - 261 296 - -
Glsi10g1047 355 PANTHER ALCOHOL DEHYDROGENASE 12 263 - -
Glsi10g1047 355 SUPERFAMILY GroES-like 11 194 IPR011032 -
Glsi10g1047 355 Gene3D - 189 258 - -
Glsi10g1047 355 FunFam Uncharacterized protein 189 255 - -
Glsi10g1047 355 Pfam Zinc-binding dehydrogenase 212 254 IPR013149 -
Glsi10g1047 355 Gene3D - 297 348 - -
Glsi10g1047 355 SUPERFAMILY GroES-like 306 352 IPR011032 -
Glsi10g1047 355 Pfam Alcohol dehydrogenase GroES-like domain 43 170 IPR013154 -
Glsi10g1047 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 316 IPR036291 -
Glsi10g1047 355 Gene3D - 23 188 - -
Glsi10g1047 355 FunFam alcohol dehydrogenase 1-like isoform X1 25 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1047 Glsi-ChrGlsi10 6970066 6971952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1047 43 293 Monolignol Biosynthesis Gene Families AT4G37970 24.731 5.11e-08 52.0