Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1014 ATGGCTTTTGTCCCTCTCTCCCTCTCTCTCTCATCCATTTTCTCATTTCACCTCTCACGCAACTACCCACCCAGCTCAATAATCATGGGCTACCTCTCTTGCAACGCTCACTCTGCAATCGCTACCTGTGATCCTCACAATTGGGATCTCAAGAAGAAGAAGAAGAAGAAGAATCCCAACCCAACGACAACAACCGCCCATAAGCATAAGCTCCCAGAGATCAGGGAGTTTCAGTACTCCGAGCTCCTCGCTGCCACCAATGGTTTCTCAGCAGATAGCTTCTTAGGCAAAGGCAGCCACGGCAGTGTTTACAGAGCCACCCTCGATGACGGCATGCTGATTGCTGCCGTCAAAAGAACAAAGTTCTCCGCGGCAAACCTTCGCAACAACTCCACCAACTGTACCAGCCCTGCGGAGAACGAGATCGAGATTCTCTCCAGAGTTCGAAATCCTCGCCGCTTCGTCAACCTCATTGGGTTTTGCACTGACTCCAACCACAACCAATTGATTGTCGTTGAATACATGCTCAATGGTTCGCTCTACGATGTCTTGCACTCCGCCACTAGACCGCCCGGTTGGAGCAGGCGGGCCCGGTTCGCTTTGCAAGTGGCCAAAGCGGTTCAGGCTCTGCACTCTTCGAACCCGCCCGTGATTCACCGAGACATAAAGTCGTCCAACGTATTGCTGGACGAGAAGTGGAAAGCGAGGCTGGGTGATTTCGGTCTGGCTCTGAGGGGACAAGTGGAGGATGTCCGCATGAAGTGCACACCACCGGCGGGGACGTTAGGATATCTGGACCCTTCCTATGTTGCGCCAGAGGATGTAAGCACGAAGAGCGACGTCTTCAGTTTTGGGATCTTGTTGTTGGAGATTATCAGTGGCAGGAACGCCATTGATTTGAATTACAGCCCGCCCTCTGTGGTAGACTGGGCCGTGCCCTTGATAAAGCGTGGGGAATTCGTCGGGGTCTGTGACAGGAGGATTGGGACGCCGTCGAACTCGGCGACTATCAGGCAATTGGCGGTATTGGCAGCCAGGTGTGTAAGGTCGACGGCGGAGAAGAGGCCATCGATGTGGGAGGTGGTGGAGTGCCTTGAACAAGTGAAGAAGAGGATTCATGCGATGCCGATATGGAGGGGTGTATGGCGGCGGGAGGAAAATGCGGAACCGGTGACCAAGTGGGAAGTGTTTGATAGGAGTGAAGAAGTGGGGAAGGTGGTAAAAGTGGGGAGCAGAAGGAACGGGAAAGTTTCAAGTGTGGGTGGTGTAGAGGGTTGCGAGAGTGAAGCTAAGGATGGAGTGTTGAGGTCGAGATCGATGAAAATGCAGTGGGATCCAAATCCCAGTATGGGTGTATTCGTGAGGAGGAAAGCAGGTGTGGAGGTGAAAATGGGAGAGGCTGTGACGCTGAACAAGTCCAGGTCTATGGGAGTTTGA 1437 0.5317 MAFVPLSLSLSSIFSFHLSRNYPPSSIIMGYLSCNAHSAIATCDPHNWDLKKKKKKKNPNPTTTTAHKHKLPEIREFQYSELLAATNGFSADSFLGKGSHGSVYRATLDDGMLIAAVKRTKFSAANLRNNSTNCTSPAENEIEILSRVRNPRRFVNLIGFCTDSNHNQLIVVEYMLNGSLYDVLHSATRPPGWSRRARFALQVAKAVQALHSSNPPVIHRDIKSSNVLLDEKWKARLGDFGLALRGQVEDVRMKCTPPAGTLGYLDPSYVAPEDVSTKSDVFSFGILLLEIISGRNAIDLNYSPPSVVDWAVPLIKRGEFVGVCDRRIGTPSNSATIRQLAVLAARCVRSTAEKRPSMWEVVECLEQVKKRIHAMPIWRGVWRREENAEPVTKWEVFDRSEEVGKVVKVGSRRNGKVSSVGGVEGCESEAKDGVLRSRSMKMQWDPNPSMGVFVRRKAGVEVKMGEAVTLNKSRSMGV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1014 478 FunFam Serine/threonine-protein kinase-like protein 175 378 - -
Glsi10g1014 478 PANTHER OS01G0253100 PROTEIN 49 371 - -
Glsi10g1014 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Glsi10g1014 478 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Glsi10g1014 478 SMART serkin_6 89 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1014 478 SUPERFAMILY Protein kinase-like (PK-like) 66 366 IPR011009 -
Glsi10g1014 478 Gene3D Transferase(Phosphotransferase) domain 1 175 376 - -
Glsi10g1014 478 Gene3D Phosphorylase Kinase; domain 1 60 174 - -
Glsi10g1014 478 ProSiteProfiles Protein kinase domain profile. 89 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g1014 478 Pfam Protein tyrosine and serine/threonine kinase 93 365 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1014 Glsi-ChrGlsi10 6779068 6780504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1014 75 415 Receptor kinase-like Gene Family AT3G59420 39.193 2.90e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Glsi10g1014 PK_Tyr_Ser-Thr 7.8e-38 CL0016