Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1009 ATGGTGCCGAGAAATGATTCTATGCCAGATTATGCGTCCACTGCACTACCTCATTTGCGGTTAGGACAGTCTTATGAACCTCATGGTTGGTCATACTGTTTGCCTCGCTTTCGACAGGCATTTACGCCTGCCCCAAACTTCACTGTTGAGGAAAAACTCTCTGCTGGCCATAGGAAAGGTTTTGGGGAGGAAATTGCACCCTATGGGATATCGGGCTTCCCTCAGAAGCAATTTATCGTTATTGATCAGACGGTTGATCAAACGAGATTCGTATATAGTTCTGGGTTTGGGAATCCCGTTGAGTGCCTTGCTTCTTGGCATTCGAAATTGCATGGTTCTAACTATTTGAATAGGAATGAACCTTCTTTTAGAAGAGATTTGAATCATCTGAACGGACCAACATTGATTGATAAAGTTGATGAAAATGAGGGAACTGACGTCCAAAGCGAGATGCATGAAGACACAGACGAAATCAATGCATTGCTTTACTCTGATAGCGATGGTTATTCCACTGAGGATGATGAAGTTACTAGCACAGGGCATTCGCCCAGTACAATGACCACTCATGATAACCAAGACATCTTTTGGGCTAGCAATGAAGAAGTTGCAAGCTCCGCAGGTAAAACAAAGAAGCGGAAGCTATCAGATGGGCCTTATGATGACATGCAACTCCTGGACAGTGCCAGTTCTCTGAATCTGAACAGATCCTTTGACAATGGAGACGATGCAGAATCAAGATGTTCTAGTGGCAACAGTCAAGGGTCAGGTGAAATGGGATCCTTGTCAGGCAGTAAGAAGATGAGAAAGGAGAGGATACGAGATGTTCTGAACATTCTGCAAAGCATAATTCCTGATGGAAGAGAAAGGGATCCAATTGGGCTTCTTGATGAAGCAATACGTTGCTTGAAATCCTTGAAACACAAGGCTATAGCTCTTGGACTTGATGACTTGTAA 954 0.4371 MVPRNDSMPDYASTALPHLRLGQSYEPHGWSYCLPRFRQAFTPAPNFTVEEKLSAGHRKGFGEEIAPYGISGFPQKQFIVIDQTVDQTRFVYSSGFGNPVECLASWHSKLHGSNYLNRNEPSFRRDLNHLNGPTLIDKVDENEGTDVQSEMHEDTDEINALLYSDSDGYSTEDDEVTSTGHSPSTMTTHDNQDIFWASNEEVASSAGKTKKRKLSDGPYDDMQLLDSASSLNLNRSFDNGDDAESRCSSGNSQGSGEMGSLSGSKKMRKERIRDVLNILQSIIPDGRERDPIGLLDEAIRCLKSLKHKAIALGLDDL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1009 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 256 305 IPR011598 GO:0046983
Glsi10g1009 317 MobiDBLite consensus disorder prediction 134 153 - -
Glsi10g1009 317 PANTHER TRANSCRIPTION FACTOR BHLH145 1 315 IPR037546 -
Glsi10g1009 317 MobiDBLite consensus disorder prediction 139 153 - -
Glsi10g1009 317 MobiDBLite consensus disorder prediction 225 260 - -
Glsi10g1009 317 MobiDBLite consensus disorder prediction 165 266 - -
Glsi10g1009 317 MobiDBLite consensus disorder prediction 205 219 - -
Glsi10g1009 317 MobiDBLite consensus disorder prediction 173 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1009 Glsi-ChrGlsi10 6750013 6750966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1009 29 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 29.252 9.19e-21 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1009 10 6750013 6750966 Glsi10g1009 10 6750013 6750966 ECH