Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1005 ATGGCACCCAGTTTTGATTGTGTTTCAAGTCTTCTTTGTGCAGAAGACAACAGCGTTTTCGATGATAACGATTACGGGGGTACGATGGAGCTGTTCGAGAATACATGGCATCACAGATATCATCGACTCCATAATCAAAGCCAGTACTTTGATGACACAAATGGGTTGCCATTGCAGAGTGATGAGTCTTTGGCGTTTATGGTGGAAAGGGAATGCCAACACATGCCTTCTGCCCATTACTTGAATAGGCTACAGAGTGGAGATTTGGACTCCGGGGCCAGGAAGGAAGCCATTGATTGGATTGAAAAGGTTCGAGCATATTTCCGTTTTGGACCTCTCTGTGAATATCTATCCATAAACTACTTGGATCGCTTCCTTTCTGCGTATGAATTACCAAAGGGAAAAGCTTGGTCAATGCAGTTGATGGCTGTGGCATGCTTATCTCTCGCAGCTAAACTAGAGGAGACTGAAGTTCCTCTGTCTCTTGATTTGCAGGTGGGTGAATCAAAGTTTATATTTGAAGCTAGAACAATACAGAGAATGGAGCTTCTTATACTGAGCACACTGAGGTGGAGAATGCAAGCAATTACTCCTTTCTCTTTCATAGACTATTTCCTTTGCAAGATCAGTGAAGATCAAAGTCCACCAAGAGCATCAATTTCTCGATCCATCCAACTTATATTGAACACCGCAAGAGGGATTGACTTCTTGGAATTCAGGCCATCAGAAATTGCAGCAGCAGTGACAATATCTGTTGTGGCGGAAACCCAAACAGTTAACACAGAGAAAGCAATTTCTGTTGTTATTCAACATGTAGAAAAGGAGAGAGTATTGAAATGCATTAAAATGGTCCAAGAGTTGTCATCAAACAGCAGCAGCAGCAGCTCTCCTAGTGCTACTGCTGGCCGCGTGCCCCAAAGCCCAATAGGGGTGTTGGATGCTGCGTGCTTGAGCTATAAAAGTGATGAAATAAATGAAGGTTCATGTGCAAATTCTTCACATAATAGCCCAGATGCTAAAAGGAGGAAGCTAAGCAAAACTTGTGGAGTAGACCTATTATAG 1062 0.4294 MAPSFDCVSSLLCAEDNSVFDDNDYGGTMELFENTWHHRYHRLHNQSQYFDDTNGLPLQSDESLAFMVERECQHMPSAHYLNRLQSGDLDSGARKEAIDWIEKVRAYFRFGPLCEYLSINYLDRFLSAYELPKGKAWSMQLMAVACLSLAAKLEETEVPLSLDLQVGESKFIFEARTIQRMELLILSTLRWRMQAITPFSFIDYFLCKISEDQSPPRASISRSIQLILNTARGIDFLEFRPSEIAAAVTISVVAETQTVNTEKAISVVIQHVEKERVLKCIKMVQELSSNSSSSSSPSATAGRVPQSPIGVLDAACLSYKSDEINEGSCANSSHNSPDAKRRKLSKTCGVDLL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1005 353 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Glsi10g1005 353 Gene3D - 66 282 - -
Glsi10g1005 353 SUPERFAMILY Cyclin-like 178 287 IPR036915 -
Glsi10g1005 353 SUPERFAMILY Cyclin-like 56 193 IPR036915 -
Glsi10g1005 353 FunFam D2/4-type cyclin 77 189 - -
Glsi10g1005 353 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Glsi10g1005 353 CDD CYCLIN_AtCycD-like_rpt2 196 284 - -
Glsi10g1005 353 Pfam Cyclin, C-terminal domain 196 295 IPR004367 -
Glsi10g1005 353 FunFam D6-type cyclin 190 282 - -
Glsi10g1005 353 SMART Cyclin_C_2 196 320 IPR004367 -
Glsi10g1005 353 PANTHER CYCLINS 61 292 IPR039361 -
Glsi10g1005 353 SMART cyclin_7 99 187 IPR013763 -
Glsi10g1005 353 Gene3D - 77 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1005 Glsi-ChrGlsi10 6736376 6738344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1005 25 330 Core Cell Cycle Gene Families AT2G22490 47.040 9.11e-87 264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1005 10 6736376 6738344 Glsi10g1005 10 6736376 6738344 ECH