Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1003 ATGAGAATCTCGGTCGGCTTGGTCTTGTCCGGGGCAGTTGTCGTGCCATCATGTTCAAACCCCAGGTTTTCTAGGAAAGACGAAGATGGGGTCGGAGTGGTCCTGTCTCTGCGTGCGGCCAGCGTCTTAATTGTGCAGCTATTCATCCGAGTTCCAAGACATTTTCCCGGGGTTATCATCCCTGGCGTCCTAGTCATCAACGTCATCGACGGCCGCCAAGACAGCTCACTGCTACCCCCAAATCACACCTCAAAAGATTCGTGCACTAGTGGGACTCTAATCAACCTAAGATATAAAACCCCCACCACACTACCGCTTTCTCTCTCCAATCCTTACTTTCTGTTTCTGTTTCTCTCCTTGTTCTCCATTCCTTTTGTGGGTCTGCTTCTGAAAATGGTGTCCGTGGTCCCAGAAAACCTAACCAGAGATCAGTACGTGTACCTGGCCAAGCTTGCCGAGCAAGCCGAGAGGTACGAGGAGATGGTTCAATTCATGCAGAAGCTTGTTCTGGGTTCAACTCCTGCCTCAGAGCTCACCATCGAAGAGAGGAATCTCCTCTCTGTTGCCTACAAGAATGTGATCGGCTCCCTCCGAGCCGCGTGGCGGATTGTCTCCTCCATCGAGCAGAAGGAGGAGGGTCGCAAGAACGAGGAGCACGTTAGTTTGGTTAAGGATTATAGATCCAGGGTGGAGTCAGAGCTGTCGGAGCTGTGTGCAAACGTCTTGAGGCTGTTGGACTCGAATCTAATTCCATCTGCTTCCACCAGTGAATCAAAGATCTTTTATTTGAAAATGAAAGGGGATTATCACAGGTATTTGGCTGAGTTTAAGATTGGGGATGAAAGGAAGGCCGCTGCTGAGAATACTATGTTGGCTTACAAGGCTGCCCATGACATTGCTTTTGTGGATCTCCCCCCTACTCATCCCATAAGATTGGGTCTAGCACTTAACTTCTCTGTGTTCTACTACGAAATTCTCAATCAGTCTGATAAAGCGTGTGGTATGGCTAAACAGGCTTTTGAAGATGCAATTGCTGAGCTGGATACCTTGGGAGAAGAATCCTACAAAGACAGCACGCTCATTATGCAACTTTTAAGAGATAACCTCACCCTTTGGACTTCAGATGTCCAGGATCAGCTAGATGAGCCTTGA 1152 0.4861 MRISVGLVLSGAVVVPSCSNPRFSRKDEDGVGVVLSLRAASVLIVQLFIRVPRHFPGVIIPGVLVINVIDGRQDSSLLPPNHTSKDSCTSGTLINLRYKTPTTLPLSLSNPYFLFLFLSLFSIPFVGLLLKMVSVVPENLTRDQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPASELTIEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKDYRSRVESELSELCANVLRLLDSNLIPSASTSESKIFYLKMKGDYHRYLAEFKIGDERKAAAENTMLAYKAAHDIAFVDLPPTHPIRLGLALNFSVFYYEILNQSDKACGMAKQAFEDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1003 383 Gene3D - 129 382 IPR036815 -
Glsi10g1003 383 Pfam 14-3-3 protein 148 373 IPR023410 -
Glsi10g1003 383 PRINTS 14-3-3 protein zeta signature 226 250 IPR000308 -
Glsi10g1003 383 PRINTS 14-3-3 protein zeta signature 346 375 IPR000308 -
Glsi10g1003 383 PRINTS 14-3-3 protein zeta signature 257 279 IPR000308 -
Glsi10g1003 383 PRINTS 14-3-3 protein zeta signature 177 206 IPR000308 -
Glsi10g1003 383 PRINTS 14-3-3 protein zeta signature 319 345 IPR000308 -
Glsi10g1003 383 PRINTS 14-3-3 protein zeta signature 292 318 IPR000308 -
Glsi10g1003 383 ProSitePatterns 14-3-3 proteins signature 1. 183 193 IPR023409 -
Glsi10g1003 383 FunFam 14-3-3 protein epsilon 139 383 - -
Glsi10g1003 383 ProSitePatterns 14-3-3 proteins signature 2. 355 374 IPR023409 -
Glsi10g1003 383 Coils Coil 148 168 - -
Glsi10g1003 383 PANTHER 14-3-3 PROTEIN 142 377 IPR000308 -
Glsi10g1003 383 SMART 1433_4 142 382 IPR023410 -
Glsi10g1003 383 SUPERFAMILY 14-3-3 protein 141 375 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1003 Glsi-ChrGlsi10 6722256 6725248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1003 139 377 14-3-3 family AT5G65430 85.356 1.31e-154 434