Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1001 ATGATGAGGGAGCAGTGGGACGACAACATCCCCGAACAAGACCAAACCGACCAAGATTCTTATCTTAATTTCGATTTACTCTCTGCCCTGTCTATGCCCAAGGATTATTATAAGATCTTGGAAGTGGATTATGATGCTACAGATGATATTATTCGGTCCAATTACATTCGTCTAGCTCTGAAATGGCATCCGGACAAGCAGAAAGACCAAGATATTGCAACCTCACGATTTCAAGTGATAAATGAGGCCTACCAGGTTTTAAGTGATCCTGTCAAAAGGAAAGAATATGACAAAAATGGGATGCTTTATGTTTATGATTACAATCTTAATGATTATCTTAATCGTTACAAGGGCCTTATATTGACGTGTAATGGTCTCGGCATAAAACATTCTATATGCCAGGATACAGTCACAAACAGAGCTATCAAGCCTGCACTTGCACCTGTGCGTGAAATAAGGCAGAGCATTTCAGTGGACCAGGTAGTTCTTCTAATTGTTTGGAAACTAATACCAGAAGCAGACTAA 525 0.3981 MMREQWDDNIPEQDQTDQDSYLNFDLLSALSMPKDYYKILEVDYDATDDIIRSNYIRLALKWHPDKQKDQDIATSRFQVINEAYQVLSDPVKRKEYDKNGMLYVYDYNLNDYLNRYKGLILTCNGLGIKHSICQDTVTNRAIKPALAPVREIRQSISVDQVVLLIVWKLIPEAD 174
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1001 174 PRINTS DnaJ domain signature 92 111 IPR001623 -
Glsi10g1001 174 PRINTS DnaJ domain signature 55 70 IPR001623 -
Glsi10g1001 174 PRINTS DnaJ domain signature 72 92 IPR001623 -
Glsi10g1001 174 PRINTS DnaJ domain signature 37 55 IPR001623 -
Glsi10g1001 174 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 132 - -
Glsi10g1001 174 FunFam Chaperone protein DNAj, putative 27 114 - -
Glsi10g1001 174 ProSitePatterns Nt-dnaJ domain signature. 77 96 IPR018253 -
Glsi10g1001 174 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Glsi10g1001 174 Pfam DnaJ domain 35 97 IPR001623 -
Glsi10g1001 174 SUPERFAMILY Chaperone J-domain 34 120 IPR036869 -
Glsi10g1001 174 CDD DnaJ 35 89 IPR001623 -
Glsi10g1001 174 Gene3D DnaJ domain 27 114 IPR036869 -
Glsi10g1001 174 SMART dnaj_3 34 92 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi10g1001 Glsi-ChrGlsi10 6715257 6719595 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1001 28 99 C2H2 Transcription Factor Family AT1G74250 40.260 2.57e-09 53.5