Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0983 ATGGAGGGTAATGCAAACAGTGCCGAAGCCGAGCGCTTGCTTGGGATCGCTGAAAAGCTGTTATTCAAGTGGGATCTCACCGGCTCACGGGAATTTGCCATTTTGGCCCAGGAAACCGAACCCCTTTTAGAGGGTTCTGATCAGATCTTGGCCATCGTCGACGTCCTCCTCGCCGCCGAGAAGCGTATTAATAACCACCTCGACTGGTACGCTATTCTTCAGGTCGATCGCCGATCTGACGACTTCGATTTCATCAAGAAGCAATACCGTAGGCTCGCGCTTCTCCTTCACTCTGACAAGAACAGATTCTCCCTCGCCGATCGCGCTTTCCAGCTCGTCGCCGAGGCCTGGGCTGTCTTATCGGACCAATCCAAAAAGTCTCTGTACGACAAGGAGCTAAGCTTATTCTCTAGGGTCGATTTGAGCACGCCCGGTTGGATTCAACAAGACAAATTGCCGGTTCGGCTCTGGCCGAGTGGTGGGAACCAAGGTTTTAATCCCAGGAACAGTAGCAACGCCCCTAGGGACGACGGGGCCGATGAGAATTCAGAGCGGAGATTGTCGACCTTTTGGACGGCGTGCCCGTACTGTTACTTGCTATGCGAGTATCACAGGGTTTACGAGGGTTGTTGCTTAAGGTGCCAGAGTTGTGAGAGGTCATTCCATGGTGTTTCAATTCCGTCTTTGCCGCCACTTGTGCCGGGCCAGGAGGCGTATTATTGTTGCTGGGGTTTCTTTCCACTTAGTTTTGCCACTGGAAATTCGGGTGGCAAGCGGGATCCTCCACCCGTGGGGTTTTCAAATTGGACGCCACTGGTATCTGCTACTGGTCAGCAGCCAGAGAATGACCGGAAAAATGCGGAACCGTTGGCAGCCACAAGGCCGACGGAGACCGCGGCGAAGGCGATGCCAGTGGGTGTTTCGAATGGGATCGCTTCAGATTTGGGATCTACTAGGCGGAAGCGAGGAAGGCCACGGAAAAATACTTTGCCGTCATGA 999 0.5365 MEGNANSAEAERLLGIAEKLLFKWDLTGSREFAILAQETEPLLEGSDQILAIVDVLLAAEKRINNHLDWYAILQVDRRSDDFDFIKKQYRRLALLLHSDKNRFSLADRAFQLVAEAWAVLSDQSKKSLYDKELSLFSRVDLSTPGWIQQDKLPVRLWPSGGNQGFNPRNSSNAPRDDGADENSERRLSTFWTACPYCYLLCEYHRVYEGCCLRCQSCERSFHGVSIPSLPPLVPGQEAYYCCWGFFPLSFATGNSGGKRDPPPVGFSNWTPLVSATGQQPENDRKNAEPLAATRPTETAAKAMPVGVSNGIASDLGSTRRKRGRPRKNTLPS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0983 332 SMART dnaj_3 67 125 IPR001623 -
Glsi10g0983 332 PRINTS DnaJ domain signature 70 88 IPR001623 -
Glsi10g0983 332 PRINTS DnaJ domain signature 105 125 IPR001623 -
Glsi10g0983 332 PRINTS DnaJ domain signature 89 104 IPR001623 -
Glsi10g0983 332 CDD DnaJ 68 122 IPR001623 -
Glsi10g0983 332 MobiDBLite consensus disorder prediction 160 181 - -
Glsi10g0983 332 Gene3D DnaJ domain 57 140 IPR036869 -
Glsi10g0983 332 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Glsi10g0983 332 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Glsi10g0983 332 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 293 - -
Glsi10g0983 332 Pfam DnaJ domain 68 130 IPR001623 -
Glsi10g0983 332 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Glsi10g0983 332 MobiDBLite consensus disorder prediction 256 332 - -
Glsi10g0983 332 MobiDBLite consensus disorder prediction 269 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0983 Glsi-ChrGlsi10 6600710 6601708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0983 2 330 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 48.256 1.12e-95 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0983 10 6600710 6601708 Glsi10g0983 10 6600710 6601708 ECH