Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0980 ATGGCCTATCCAGGTTCAATGCAATTGTCTCACGACATTAGGGCCTACAGTAATAGTGGATGCTGCAGTTTTCATCATAATCCAAGGGCTGTTGGTAGATTACATTTGGTTACCATCAATCTTTCATCACATGGTTTGAGGCAGGATTCTTCAACTCTCAATCTTTTAAGTAAAGTAAATGCTCCACTAAGGCCTGTGCCTTCCAGATGTAATGTTTTATTGTGTCAGTCTGTACTAATACCAGGGGGAGGGAGTTGGACTCCACACATGAAGTCTGCTTCTATTATCTTGAAAAGGTCATATAATGCTTTACAAGGAAGCCCCGTCGTGCTTCAGTTGATCCCAGCCCTTGGTGTCATTGCCTTTGCTGTTTATGGTCTTGAGCCACTCCTGCGTCTGAGCAGGATTATATTTCTCCAAAGGAATGATAATAGTTGGAAGAAAAGCAGTTCGCATTATATTATGACATCTTATTTTCAGCCTTTGCTTCTGTGGACAGGGGTAATGCTTATCTGCAGGGCATTAGATCCACTAGTCCTAACATCAGAAGCCAGCCAGGTTGTGAAGCAACGACTGCTGAATTTTGTGAGATCTTTGTCAACAGTGCTCTCATTTGCCTACTGTTTATCAAGCTTAATTCAACAAGCACAAAAATTCATTATGGAGGCTAATGAATCCAGTGATGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTGTATACTGCAGTGTGGGTTGCTGCTGTGTCATTGTTCATGGAGCTGCTAGGTTTCTCCACACAGAGGTGGTTAACTGCTGGTGGTTTGGGTACAGTATTGCTCACTCTTGCAGGTCGTGAGATATTCACGAACTTCCTTTCGAGTATAATGATTCATGCAACTCGACCTTTTGTTGTGAACGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCTAATCACAAGTTCACTGTTAATGTTGTGCGGAATCTTACTCAGAAATCTCATTGGCGTGTCAAGACTCACCTTGCCATCAGTCACTTGGATGTTAATAAGATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGGCCAAAAATCCTCAGGTAGAGCAGCAAAAGTTGCACAGAAGGGTTTTTCTGGAGAATGTCAATGCAGAAAATCAATCCCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACACTTCGAAGAATACCTCTGTGTTAAGGAGGCCATCCTTTTGGATCTTCTCAGAGTTATAAGTCATCATCGAGCCCGGTTAGCCACACCCATCCGCACTGTTCAGAAAATATACAGTGAGGCTGACTTAGAAAATATACCATTTGGTGACACCATTTTCACTCGTTCCAGAGCGGCGACAAATCGTCCATTTCTGCTGATAGAACCACCTTATAAAGTTAATGGTGAAGATAGAGTTAAGGCTTCACCTCGTTCAGCTCGTACAAGTGAAGAAAAAGATGCCAAGATTGATGAGTCTTTGACACCTGATTCCAAAGGAGATGACCTTTTTGCAGCAACATCAACCTCTACGTCCAATGCTAACTCCAGGGACAAGTCGAAGTCAATTTCTGAAGCACAAACCCAGAATATGGGTTCTGATAGTTCAGTCCAGAAGACCTCCAAAACCCTTCAGTCCAAAAAGGAAAGTGCGGGAGAAGCAGGAAAGGGAACTGCTGCTCCAGTAACTAAAGACCTTGCACAAAGTGCCATGCCTGAAAATTCTTCTGTTACATCCCACGAGTCTGGAAAGGGAGAGATTGCTTCTACTACTTCTTCACAGGCAAAGCAAGATGCTGTATCCTCCTCATCAGTCACGCCTTCCTTGGAAGAAAATATTGTTCTTGGTGTTGCCCTAGAGGGCTCAAAACGAACTCTTCCAATTGATGAAGAAATGACTCCGCCTTCTTCTATCCCTGCAGAGTCACAAGAATTTGCTGCCCAACGAAATGGTAATGGACCTCCTGCCAGCAAAGATAAAAAAGATGGTCATATGTCCTCATTTCCGACCTCCAAACAGAGTGATTAG 2112 0.4261 MAYPGSMQLSHDIRAYSNSGCCSFHHNPRAVGRLHLVTINLSSHGLRQDSSTLNLLSKVNAPLRPVPSRCNVLLCQSVLIPGGGSWTPHMKSASIILKRSYNALQGSPVVLQLIPALGVIAFAVYGLEPLLRLSRIIFLQRNDNSWKKSSSHYIMTSYFQPLLLWTGVMLICRALDPLVLTSEASQVVKQRLLNFVRSLSTVLSFAYCLSSLIQQAQKFIMEANESSDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRVKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVNAENQSLMILISCFVKTSHFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDTIFTRSRAATNRPFLLIEPPYKVNGEDRVKASPRSARTSEEKDAKIDESLTPDSKGDDLFAATSTSTSNANSRDKSKSISEAQTQNMGSDSSVQKTSKTLQSKKESAGEAGKGTAAPVTKDLAQSAMPENSSVTSHESGKGEIASTTSSQAKQDAVSSSSVTPSLEENIVLGVALEGSKRTLPIDEEMTPPSSIPAESQEFAAQRNGNGPPASKDKKDGHMSSFPTSKQSD 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0980 703 MobiDBLite consensus disorder prediction 596 638 - -
Glsi10g0980 703 Gene3D - 192 296 - -
Glsi10g0980 703 MobiDBLite consensus disorder prediction 530 576 - -
Glsi10g0980 703 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 695 IPR045042 -
Glsi10g0980 703 MobiDBLite consensus disorder prediction 497 526 - -
Glsi10g0980 703 MobiDBLite consensus disorder prediction 497 703 - -
Glsi10g0980 703 MobiDBLite consensus disorder prediction 664 678 - -
Glsi10g0980 703 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Glsi10g0980 703 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Glsi10g0980 703 Gene3D - 297 350 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0980 Glsi-ChrGlsi10 6566105 6572107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0980 6 659 Mechanosensitive Ion Channel Family AT1G58200 57.121 0.0 753