Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0973 ATGGTGGAAAGTACCAAGAAGCATGCGAAGGTCTCTTTTAGCGAGGAAGATGCTGGTACTCTCATACAGAGGTATGAGGCAGCCACGATATTAACATTGCTGCAGGAAGTGGCGCGTTATCCTAATGTGAAGATTGATTGGAATGAGTTGGTCAAAAATACCTCAACTGGGATTTCTAATGCTAGAGAGTATCAGATGTTATGGCGTCATTTGGCGTACCACGATGCCTTACCTGGAAATTTGGACGACGGGGCTGAACCTCTGGATGATGATAGTGACCTAGAATGTGAAGTGGAAGCGTTGCCCCCTATGACCAATGAGACTGCATTAGAGGCTGCAGCGTGTGTGAAGGTAATGATTGCTTCTGGTATACTAAGTGAATCCAGTCCTAGTAGCTCAACAATTGAGGCTCCAATGACTATAAATGTTCCAGTTTGCCGTTCATCTAGAACTCCTGAAGAGAATTCACAGCCCTCTAATTTGATGCTAGGAACAAATATTATTTTTCCTGTTACTGTTCAGAGACAGACACTGCCAACTGTATCATCAACAGAAGGTGTAGAAGCCAAGGGATCAGCCGGTGGCAAATTGTCTTCCAAAAGGAAAAGAAAAGCATGGTCAGAAGAAGAGGACATGCAGCTACGAGCTGCTGTTCAGAGATGTGGTGAGGGGAATTGGGCAAACATATCAAAAGGAGATGACTTCCCTATCAAAAGAAGTCCTACACAGTTGGCTCAGGATGGTAATGGAAATTGTAAGAAAGAAAAGAGAAGGCAGCAACGGAGGTGGAGCATTTTACGAAAGAAAGACGGCGCTACAAATTCAGGAACCAACTTGACCAGCTCGCAGATTGCTGCTGAACATCTGGCAACTCGTCATTCCTTATCTTTAGCTCTTGATATGCCCTTAAAAAAACTAACTTCTCCTGGAACGACTGACCCTGCTACTAGGACAGCTTTAAACGCTTCAATTAAAAACCCTGTGCAGCCTGGTAATATTGTTGAAGCTTCAACAGTTCATAGCAGCTCTATACAACCTCAGCATCCTTCTCAACGAGCTTTATTGGGATCTGGTTCCCCTGCAAAATCTGAAGCCCCTGAAAAAACAATTCTGAAGTCTATTCCAAGTCCAGATTCTGCAGTAAGAGCTACTGCAGTTGCTGTTGGTGCACGTATTGTTTCCCCATCAGATATTTTGTCATTGCAAAAGACTACTCAAGAAAGAAGTGCTGTAAATCATATGCCTATAGGTAATTCTTCAATGAAGCCGTCCACAACTGGTAGTTCAATCACCTACCCAAAAGCTCATTCAAATGCCCTTAGACCTGCATCATGCACGAGTATTGTTAAAGCTGTATCCCCAACAATTGATAATACTCCTGTTGCTTTGTCAAATATGTCGACTGAACAGAACAACCCTGTTTGCTCGGGGGTCAATGAAGTTACATTAAAGCAAATTAATGCCACCCAAGAATTGAAAGTTTCTGATCCTAGTGTTGCTCCAAAAGAGAGGGTCCAAGATGATGAGGCTCCGGCTATGAAAAATTCACCAAGTGAAGAAACCTTAAAAGATAATTCAGTGTCAGAAAATCCAGCAGAGTTCGACAATCAGGAAGTTGTTAAGAATTCAAATTCTGCATTGAATACGGAGACTGCTGAGAATCGTCACATCACTGTTGATATTAACCTTGATAAGGGGAGACAAGTATCAAATCACAAGAAGACCATGAATTTGCCTATTCTTGATGGAGGTGAGTATTATTCTACAATTAATGAAAATTCTAATGGTCAAAGCATGAATGAGAAACAGGAAATTTTGCCAAGCATGGTACAAGATGAATGCAACAAAAATATGGTATTGCCGAGCTAG 1869 0.42 MVESTKKHAKVSFSEEDAGTLIQRYEAATILTLLQEVARYPNVKIDWNELVKNTSTGISNAREYQMLWRHLAYHDALPGNLDDGAEPLDDDSDLECEVEALPPMTNETALEAAACVKVMIASGILSESSPSSSTIEAPMTINVPVCRSSRTPEENSQPSNLMLGTNIIFPVTVQRQTLPTVSSTEGVEAKGSAGGKLSSKRKRKAWSEEEDMQLRAAVQRCGEGNWANISKGDDFPIKRSPTQLAQDGNGNCKKEKRRQQRRWSILRKKDGATNSGTNLTSSQIAAEHLATRHSLSLALDMPLKKLTSPGTTDPATRTALNASIKNPVQPGNIVEASTVHSSSIQPQHPSQRALLGSGSPAKSEAPEKTILKSIPSPDSAVRATAVAVGARIVSPSDILSLQKTTQERSAVNHMPIGNSSMKPSTTGSSITYPKAHSNALRPASCTSIVKAVSPTIDNTPVALSNMSTEQNNPVCSGVNEVTLKQINATQELKVSDPSVAPKERVQDDEAPAMKNSPSEETLKDNSVSENPAEFDNQEVVKNSNSALNTETAENRHITVDINLDKGRQVSNHKKTMNLPILDGGEYYSTINENSNGQSMNEKQEILPSMVQDECNKNMVLPS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0973 622 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 616 - -
Glsi10g0973 622 Pfam Myb-like DNA-binding domain 203 244 IPR001005 -
Glsi10g0973 622 MobiDBLite consensus disorder prediction 228 260 - -
Glsi10g0973 622 MobiDBLite consensus disorder prediction 497 514 - -
Glsi10g0973 622 MobiDBLite consensus disorder prediction 340 357 - -
Glsi10g0973 622 MobiDBLite consensus disorder prediction 518 533 - -
Glsi10g0973 622 MobiDBLite consensus disorder prediction 180 208 - -
Glsi10g0973 622 MobiDBLite consensus disorder prediction 340 366 - -
Glsi10g0973 622 SUPERFAMILY Homeodomain-like 201 245 IPR009057 -
Glsi10g0973 622 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 231 IPR017930 -
Glsi10g0973 622 CDD SANT_TRF 204 244 - -
Glsi10g0973 622 SMART sant 202 254 IPR001005 -
Glsi10g0973 622 ProSiteProfiles Myb-like domain profile. 198 243 IPR001005 -
Glsi10g0973 622 Gene3D - 196 255 - -
Glsi10g0973 622 MobiDBLite consensus disorder prediction 494 533 - -
Glsi10g0973 622 MobiDBLite consensus disorder prediction 411 433 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi10g0973 Myb_DNA-binding 6.9e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0973 10 6513817 6521812 Glsi10g0973 10 6513817 6521812 ECH