Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0970 ATGAACGAAGAAGAGGAGAGTTTTACAAAAACAAACTCGGCGTACCCAGGTCTTCTTTTTGACCCTGGAAAATGTGGCATGCTGAATTTGCAAGACAAACGAAAACTAGTCCATGAGATTGCTCTACAGTCAAAAGATGCGCCAAATATGCTCTATTCCTTTACTCGCCAGGAGCTTCTAGAAATAATCTGTGCTGAACTTGGCAAAGAGAGGAAGTACACTGGATATACTAAGAGTCAAATGATAGAACATCTTCTCAAGATAATTTCTAAGAAATCCAAGTTGCACACCATCCAAAATACTAGTCATATTGGTTTTAAAAGGAAAAGAGGACCTCCATCTCAAGATTTACATTATGCTCCTCTGGCAAATAATAAAGAGGAAAATGTAAAATCCTTACTGTGTCAGAACATTGCATGCAGAGCTACTTTGAGTCCAGAAGATGCTTTTTGTAGGAGATGTTCTTGCTGTATTTGTCATTTTTATGATGATAACAAGGATCCTAGTTTGTGGTTAACCTGTGGCTCTGATCTTCTTGATGAGAAGGAGTCGTGCAGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATAAGAAATCTGGCATTTTGAAGGGCAGTTGTGGTGCAAAGTTAGACGGAAGTTTCTCTTGTGTTTCTTGTGGACAAATTAATGGATTAATGAGGACATGGAGAAAGCAATTATTAGCTGCAAAAGAAGCCAGAAGAGTGGATATACTGTCATTGCGAATATCCTTGGCTTATAAAATTCTCATAGGAACTGAGGTATACAAGGAAGTACAGAATATTGTAGAAACTGCTCTTAAATTGTTGTACAATGAAGTGGGGCCTCTGGATCAGGAATGTTCAAGGATGACACGTGGCATTGTGAACAGGCTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGTTCTTCTGCTGTTGAATGTTTTGATTCAATGTTTTCTAACCTTTACTCTAACTATTTGGAAAAGAAAACTACACCAACATGCTCTATACGCTTTGAAGAGTGCCTTCCTACCTCAGTGGTCATTGTGCTAGGATATGAAGATCATCTTTTAAATGATTTTTTAGGCTGCAGGCTTTGGCACAGAATATCAACAACGGACTACCCAGAACAACCCACCTTCATTGTATTAAGGCCAGAAAAAAGATTTAAGTTAGAAAACCTCTATCCTTCAACTGAGTATTTTTGCAAGGCTTCTCTGTTTAGCAGCACGGGGATTCTGGGCACTGCAGAAGCTAAATGGGTTACACCTTGTAAGCCCACAATATCTCCTTCAAAAGTAACTAGACCTGGCAGTGGCAGGGATCATATTAGACATAAGCCTAGTGGATCCTCAGCGACCACTTTGGACATACATGCACAGGAGAAAGACAAGATAGTTGCTGAAAATCATAATCAGGTAGAATCTGCCAACTCCCACATTAACTTATCCACGGGGGACCATCGTGCAAAACATCTCTTTTTGGATAACATCAGGAGCAGGTTTGAAGGTTTCCTCTCCAAGCCGCCATTAGTTGAATCTCTTCCATTTAAAAATTTTGCTGCAGTTTCACCTCCCACACCTTCTAAATCCGATGAAATGAGACAAATTACTGGTTTGAGTGGTCGAAAGTGCCGGGAGGAAAATGATTATGAGTACTCTGTCAGGGTAGTCAAACGGTTAGAGCACGAAGGTCACATTGACCAAAACTTCAGGGTAAAATTTCTTACTTGGTTCAGCCTTAAAGCTAATCCCCAAGAGAGAAGGGTGGTTAGTGCATTTGTGGATACATTGATTGATGACCCACCAAGCTTAGCGGATCAGCTTATACACACCTTCATGGACGAAATATGCTGCGAGCAAAAACCTTAG 1875 0.4043 MNEEEESFTKTNSAYPGLLFDPGKCGMLNLQDKRKLVHEIALQSKDAPNMLYSFTRQELLEIICAELGKERKYTGYTKSQMIEHLLKIISKKSKLHTIQNTSHIGFKRKRGPPSQDLHYAPLANNKEENVKSLLCQNIACRATLSPEDAFCRRCSCCICHFYDDNKDPSLWLTCGSDLLDEKESCRMSCHLQCALSNKKSGILKGSCGAKLDGSFSCVSCGQINGLMRTWRKQLLAAKEARRVDILSLRISLAYKILIGTEVYKEVQNIVETALKLLYNEVGPLDQECSRMTRGIVNRLSCGAEVQKLCSSAVECFDSMFSNLYSNYLEKKTTPTCSIRFEECLPTSVVIVLGYEDHLLNDFLGCRLWHRISTTDYPEQPTFIVLRPEKRFKLENLYPSTEYFCKASLFSSTGILGTAEAKWVTPCKPTISPSKVTRPGSGRDHIRHKPSGSSATTLDIHAQEKDKIVAENHNQVESANSHINLSTGDHRAKHLFLDNIRSRFEGFLSKPPLVESLPFKNFAAVSPPTPSKSDEMRQITGLSGRKCREENDYEYSVRVVKRLEHEGHIDQNFRVKFLTWFSLKANPQERRVVSAFVDTLIDDPPSLADQLIHTFMDEICCEQKP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0970 624 CDD PHD_VIN3_plant 155 220 - -
Glsi10g0970 624 PANTHER VIN3-LIKE PROTEIN 2-RELATED 19 478 IPR044514 GO:0010048|GO:0040029
Glsi10g0970 624 MobiDBLite consensus disorder prediction 432 457 - -
Glsi10g0970 624 Pfam PHD - plant homeodomain finger protein 135 254 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0970 Glsi-ChrGlsi10 6481935 6486673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0970 12 424 PHD Gene Family AT4G30200 39.446 8.75e-84 273