Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0965 ATGCCTCACAGAACGACTTACTTTTTCCCGAGGCAGTTCCCGGTGCGTGGGTGGGATGAATCTTCCAAACAGCTATTAGATCACGAGAAGAAGAAAATTGTCAACTCCACCAAATCAGAAACCTTTGGCGTTGAAAGCGACCCAAAAAAGCCAGCATCAACTAATACAACAAAGGACGATGTCGTTTTCTCGTCTGGCAAACACTCACCTGTATCCGACCTTTTCACGGGCAGTGACAAGTTCCGAATCAAACAGAAGCAAATTGCTGCTTTCTGCGACTGGTTGACGGAGAAAAAAGGGCATAGATCAGGTCACGTCAAGCCGCCCTCCGGCCGGTTATCATGCGAGGAGGACCGCGAGCTTCTGCTTCCTCCGGAGTCTGTGCCGGCACCGCCTCTTCCTCCTCCTGAGACAGTCAAAGATGCTGCCATTGACCGGAGTTTTGACCGTCAGGTGTCGTTGCCTAGATTATCCAGTGGGAGTAGCTATGCTGGCAGCTTGTTCTCGGGGACAACCTTGGACGGAAATTTTTCTAGCGACATTAAGGAGGAGACGTCATCGTCTCGGGTCTCCACCACAACGAGAAGACCGGAGGAAGACGAGGAAGAGAATAAGAAGAGGTTGGCGCAGAAGTCCAGAGAGGGCTACTACCTGCAGATTACACTGGCTCAGAGACTCACTTGTCTTGCAAGTCTTGCTACTGAGCCGGTGCTTACTCTCGACACTGGAATCGAGACTTGGGATGCTGAATCCGTTTCTTATCGTTTATGGGTCAGTGGCTGCTTATCATACTCTGATAAAATATCAGACGGTTTTTATAACATTTTGGGGATGAATCCATATCTATGGGTGATGTGCAATGAGCTGGAAGAAGGTAGGCGGCTCCCACCTTTGATGGCGCTTAAAGCAGTCGAACCAAGCGAAACATCTATGGAGGTTGTTCTTGTTGATAGGCACGAGGACTCTCGGCTTAAGGAACTTCATGATAAAGCGCAAGAATTGTATTGTAATTCAGAAAACACCTTAGTGTTGGTGGAAAAACTAGGAAAACTTGTCGCGATATATATGGGGGGTGCGTTCCCGGTGGAGCAAGGAGATCTCCACAAGCGATGGAAATTGGTTAGTAAGAGATTGAGGAATTTTCAGAAGTGTGTCGTGCTTCCTATCGGCAGCCTATCTTCAGGACTTTGCAGGCATCGGGCAATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCATGTCGTATTGCTCGAGGTTGCAGGTATTGTGTTGCAGATCATAGATCCTCTTGCCTTGTCAAGATTAAAGATGACAGGCAGCTCTCAAGAGAATATGTAGTTGATCTAGTTGGGGAACCAGGAAGTCTCCATGGGCCAGATTCCTCAATTAATGGAGCATATGTCTCTTCAACGCCTTCCCCATTTCAAATTTCGCATCTAAAAGATTCCCGCTCACCTTGTATGGATGATGCTTCATGTTCTCAATTTATTAGTTCCAATGACAATTCTGTTGTTCCTGAAAGTCATTTATATTCAGGCTGTGGACAGAAAGGTCAACCAGTGAAAGAAACTGATTTGCTGAAAAGTCCTACGCACTCCACTTATGCTTCAGTTGATCAAACTCGTGCAGGAAATGCTGAGGAATGTGCAGTTCTACGTTCAAATTTGTCTTCCATTCAGGAAGGTTTTTCTGAAGCTCTGCATCCAGCCACTAAGGGTTTATTTCATGAATATCCCAGGGTGGGTGAAGATTCAGTTGTCGTTCAAGAAACTTCTAATAATGAAATCATCGTAGCTGGAAGTTCTGTTGTAAAAAACACTTATAAGCAATCTATGCTGGACTCGTCCTGTCAATCAGAACAGGAACAGATAGACAGTAGACTTGAAACCCAGGGCCATTTTCCAGCTGGGAACATTCCGAGATACTTGAATCTTGAACCGTCGCTTGCAATGGATTGGCTTGAAATTTCGTGGGATGAATTACGCATTAAAGAGCGTGTTGGTGCTGGATCATTCGGGACTGTGCACCGTGCTGAATGGCATGGATCGGATGTTGCAGTCAAGGTTTTAACAGTTCAGGATTTCCAAGATGATCGGTTAAAAGAGTTTCTCAGGGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTGCTCTTCATGGGCGCAGTTACAAAACGTCCTCATCTATCTATAGTGACAGAATATTTACCTAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCATCCGGTGAAATGTTGGATCAGAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATAAATTATCTACACTGTCTGAACCCTCCAATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGATAAGAATTGGACTGTAAAGGTGTGTGATTTTGGACTGTCAAGATTTAAGGCGAACACTTTCATGTCTTCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGACGTGTACAGCTTTGGAGTCATCCTGTGGGAACTAGTGACCATGCAACAACCATGGAACGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATCGAAAGCTTGGCATCCCTCCAAACATCTCCCCAGTACTGGCCTCCCTCATGGAATCTTGTTGGGATGATGACCCTAAACAACGGCCATCTTTCTCTAATATAGTTGAATCGCTAAAGAAGCTGCTGAGGTCTCCTGTGGAGATGATAAAAATGGGTGGGAGTGGGACGTAA 2805 0.4585 MPHRTTYFFPRQFPVRGWDESSKQLLDHEKKKIVNSTKSETFGVESDPKKPASTNTTKDDVVFSSGKHSPVSDLFTGSDKFRIKQKQIAAFCDWLTEKKGHRSGHVKPPSGRLSCEEDRELLLPPESVPAPPLPPPETVKDAAIDRSFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDIKEETSSSRVSTTTRRPEEDEEENKKRLAQKSREGYYLQITLAQRLTCLASLATEPVLTLDTGIETWDAESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNELEEGRRLPPLMALKAVEPSETSMEVVLVDRHEDSRLKELHDKAQELYCNSENTLVLVEKLGKLVAIYMGGAFPVEQGDLHKRWKLVSKRLRNFQKCVVLPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCVADHRSSCLVKIKDDRQLSREYVVDLVGEPGSLHGPDSSINGAYVSSTPSPFQISHLKDSRSPCMDDASCSQFISSNDNSVVPESHLYSGCGQKGQPVKETDLLKSPTHSTYASVDQTRAGNAEECAVLRSNLSSIQEGFSEALHPATKGLFHEYPRVGEDSVVVQETSNNEIIVAGSSVVKNTYKQSMLDSSCQSEQEQIDSRLETQGHFPAGNIPRYLNLEPSLAMDWLEISWDELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFQDDRLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEMLDQRRRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFMSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNGLSPAQVVGAVAFQNRKLGIPPNISPVLASLMESCWDDDPKQRPSFSNIVESLKKLLRSPVEMIKMGGSGT 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0965 934 MobiDBLite consensus disorder prediction 37 63 - -
Glsi10g0965 934 FunFam Serine/threonine-protein kinase isoform 1 652 740 - -
Glsi10g0965 934 Pfam Protein tyrosine and serine/threonine kinase 662 916 IPR001245 GO:0004672|GO:0006468
Glsi10g0965 934 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 211 921 - -
Glsi10g0965 934 MobiDBLite consensus disorder prediction 178 192 - -
Glsi10g0965 934 SUPERFAMILY Protein kinase-like (PK-like) 640 916 IPR011009 -
Glsi10g0965 934 Gene3D Transferase(Phosphotransferase) domain 1 741 928 - -
Glsi10g0965 934 MobiDBLite consensus disorder prediction 193 208 - -
Glsi10g0965 934 ProSitePatterns Protein kinases ATP-binding region signature. 668 689 IPR017441 GO:0005524
Glsi10g0965 934 SMART serkin_6 662 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0965 934 MobiDBLite consensus disorder prediction 178 208 - -
Glsi10g0965 934 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Glsi10g0965 934 CDD STKc_MAP3K-like 668 916 - -
Glsi10g0965 934 ProSiteProfiles Protein kinase domain profile. 662 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0965 934 Gene3D Phosphorylase Kinase; domain 1 655 739 - -
Glsi10g0965 934 FunFam Serine/threonine-protein kinase CTR1 741 926 - -
Glsi10g0965 934 PRINTS Tyrosine kinase catalytic domain signature 736 749 IPR001245 GO:0004672|GO:0006468
Glsi10g0965 934 PRINTS Tyrosine kinase catalytic domain signature 843 865 IPR001245 GO:0004672|GO:0006468
Glsi10g0965 934 PRINTS Tyrosine kinase catalytic domain signature 887 909 IPR001245 GO:0004672|GO:0006468
Glsi10g0965 934 PRINTS Tyrosine kinase catalytic domain signature 777 795 IPR001245 GO:0004672|GO:0006468
Glsi10g0965 934 MobiDBLite consensus disorder prediction 36 65 - -
Glsi10g0965 934 Pfam Ethylene-responsive protein kinase Le-CTR1 249 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0965 Glsi-ChrGlsi10 6455778 6463189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0965 1 931 MAP Kinase Kinase Kinase AT4G24480 60.722 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Glsi10g0965 PK_Tyr_Ser-Thr 7.8e-66 CL0016