Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0926 ATGTTAGCCGCCTCCACTCTCCGACGTGTCTCTTCTCTTTGCTACCTCCTCTGTTTCATTTCGATACTTGGCGGTGTCCGATCCGATGAAGTTCAAATTCTACTTAATCTCAAATCCGCACTTCAGAAGTCCAGTCCCAGAGTGTTTGACTCGTGGAGTGCTACTAATTCCTTATGCAATTTCGAAGGAATCGCATGCAATTTAGACGGTTCCGTGAAGGAAATCGAGCTCTCTAATCAAAAGCTATCGGGGGTTCTTCCTTTTGACTCCATTTGCCAGCTTCAATCACTTGAGAAGCTCTCATTTGGGTTCAACTCCTTGTATGGCAAAGTTGCACGGGATTTGAAAAACTGTGTGAAATTGCAGTACCTGGACTTGGGCAACAATATTTTCTCAGGGCCATTCCCTGACATATCTCCTCTCACCCAATTGCAGTATCTATATTTGAATGGAAGTGGATTTTCTGGGACTTTTCCGTGGAAGTCCCTGCTAAATATGACGGGTCTTGTGCGGTTAAGCGTTGGAGATAATCCTTTTGCCCCAACTCCTTTTCCATCCGAGGTGGTGAACCTCAAGAACCTGAATTGGCTCTATCTCACCAATTGCACACTTACAGGGAAAATACCAGCAGGGATCGGTAACCTCACAGAGCTTATAAATTTAGAGTTTTCTGACAACTTTCTATCTGGGGAGATTCCGGCAGAGGTTGGGAAGCTTCGCAAACTATGGCAGCTTGAGCTCTACAACAATTCGTTCTCCGGAAAACTTCCATTGGGGTTAAGAAACCTCACAAAGTTAGAGTATTTTGATGGGTCCATGAATTATCTTGAAGGCGATCTCTCGGAATTGAGGTTCTTGACTAATCTGGTTAATCTGCAACTATTTGAAAACAATTTATCTGGGCGAATTCCATCGGAGTTTGGTGAGTTCGAACGGCTTGTGAACTTGTCTTTATACAGAAACAGATTGATTGGCCCTATTCCTCAAAAGCTTGGCTCTTGGGCTGAGTTTGATTTCATTGATGTGTCTGAGAACTTCTTGACGGGTCCTATTCCTCCAGATATGTGCAACAAGGGAAAGATGCATGCGCTGCTGGTGCTTCAGAACAACCTCACCGGCGAAATTCCATCTAACTATGCAAACTGTTTGTCTATGCGTCGATTCAGAGTCAGCAACAACTCGCTCTCGGGTACTATTCCTGCTGGAATTTGGGGTTTGCCAAATGCAGTAATTATCGATATTGAACTGAATCACTTGGAAGGTTCGATTACTTCAGATATCAAGAACGCGAAGACCCTGGCTTTAATATATGCTAGAAGGAATCTCTTGGCCGGTGAAATACCAGAAGAGGTTTCACAAGCTACCTCTTTGTTGACAATTGACTTGAGCGAGAATCAAATTTCTGGAAAAATTCCGACGAGTATCGGTGAGCTTAAACAACTGAGCAGTCTTCGTTTAGCGAGCAACAAGTTATCTGGGTCAATTCCAGACTCTTTGGGTTCGTGTATTTCTCTCAGTGACATTGAACTGGCACAAAATTCATTCTCTGGAAAAATGCCTTCATCTTTGGGTTCTTTACCATCTCTTAATTCTCTGAATTTGTCTAGAAATGAGCTCTCGGGTGAAATTCCGGAGAGTTTTGCGCACCTCCGCCTCAGCCTCTTTGATCTATCAGATAACAAATTAACGGGCCCAATACCACAAGCTCTGTCTTTTCAAGCTTACAATGGCAGCCTTGATGGAAATTCTGGTCTCTGCAGCTTGGGCGTGATCGGCTCCTTCAGGCATTGCTCAGCAAGTTCCGGCATGTCCAGGGAACTCCGTACACTCTTCGTTTGCTTCGCAATAGGGTTAATTATGTTGCTCGTTTGTATGGCTCTTTACTTGCAGTCGACGAGGAAGGACAAAGATCGAGAACATTCTTTGAAGGAAGAATCTTGGGATGTGAAATCCTTCCACGTGCTAAGTTTCACAGAGGATGAGATTCTGGATTCCATTAAGCAGGAGAATCAGATTGGGAAAGGAGGGTCCGGAAACGTATACAGAGTCAATCTCTCAAACGGCAAAGAACTCGCCGTGAAGCACATCTGGAATACCGATTCCACTGGCCGGAAAAAGATCCGGAGTAGTACTCCGATGCTGGCAAAGCGTAGCGGGAAGTCTAAGGAATTTGATGCGGAGGTGGAGGCCCTGAGCTCAGTAAGGCATGTGAATGTGGTGAAGCTTTATTGCAGTATAACAAGCGAGGACTCGAGCTTGTTGGTATATGAATATTTACCAAATGGGAGCTTATGGGATCGGCTTCACACAAGCAGGAAGATGGAGCTCGATTGGGATACAAGGTACGAGATTGCAGTGGGTGCAGCCAAAGGGTTGGAGTACCTTCATCATGGGTGCGAGAGGCCCGTGATTCACAGGGACGTGAAATCTAGTAACATTTTGTTGGATGAGTTCTTGAAGCCAAGGATAGCTGATTTTGGGCTAGCCAAGATTGTTCAAGCCAATGTTGGCAAGGATTCTACACATGTAGTTGCTGGAACTCACGGGTATATTGCTCCTGAATATGGGTACACTTGCAAAGTGAATGAGAAGAGTGATGTGTATAGTTTTGGGGTGGTTTTAATGGAGCTGGTAACTGGGAAAAGGCCAATTGAACCAGAATTTGGAGAACACCAAGACATAGTGAATTGGGTGTGCAGCAAGGTGCAGAGCAAAGAGAGCACAATGGGTGTGGTGGACTCCAGAATCCCGCAAGTGTACAAAGACGAGGCTATAAAGGTTTTGGATATAGCTATTCTCTGCACGGCAAGGCTTCCAGCACTAAGACCCAGCATGAGAAGTGTGGTTCAAATGCTTGAGGACGCTCAGCCTTGTAAATTGGTTGGAATCCTGGTTAGCAAGGACGGCACTGGGAAGAAAATGCGAGCGAGTGACGCAGAAAAGCTTCCATAG 2952 0.4519 MLAASTLRRVSSLCYLLCFISILGGVRSDEVQILLNLKSALQKSSPRVFDSWSATNSLCNFEGIACNLDGSVKEIELSNQKLSGVLPFDSICQLQSLEKLSFGFNSLYGKVARDLKNCVKLQYLDLGNNIFSGPFPDISPLTQLQYLYLNGSGFSGTFPWKSLLNMTGLVRLSVGDNPFAPTPFPSEVVNLKNLNWLYLTNCTLTGKIPAGIGNLTELINLEFSDNFLSGEIPAEVGKLRKLWQLELYNNSFSGKLPLGLRNLTKLEYFDGSMNYLEGDLSELRFLTNLVNLQLFENNLSGRIPSEFGEFERLVNLSLYRNRLIGPIPQKLGSWAEFDFIDVSENFLTGPIPPDMCNKGKMHALLVLQNNLTGEIPSNYANCLSMRRFRVSNNSLSGTIPAGIWGLPNAVIIDIELNHLEGSITSDIKNAKTLALIYARRNLLAGEIPEEVSQATSLLTIDLSENQISGKIPTSIGELKQLSSLRLASNKLSGSIPDSLGSCISLSDIELAQNSFSGKMPSSLGSLPSLNSLNLSRNELSGEIPESFAHLRLSLFDLSDNKLTGPIPQALSFQAYNGSLDGNSGLCSLGVIGSFRHCSASSGMSRELRTLFVCFAIGLIMLLVCMALYLQSTRKDKDREHSLKEESWDVKSFHVLSFTEDEILDSIKQENQIGKGGSGNVYRVNLSNGKELAVKHIWNTDSTGRKKIRSSTPMLAKRSGKSKEFDAEVEALSSVRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWDTRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQANVGKDSTHVVAGTHGYIAPEYGYTCKVNEKSDVYSFGVVLMELVTGKRPIEPEFGEHQDIVNWVCSKVQSKESTMGVVDSRIPQVYKDEAIKVLDIAILCTARLPALRPSMRSVVQMLEDAQPCKLVGILVSKDGTGKKMRASDAEKLP 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0926 983 Gene3D Ribonuclease Inhibitor 285 355 IPR032675 -
Glsi10g0926 983 FunFam Probable inactive receptor kinase RLK902 27 185 - -
Glsi10g0926 983 SUPERFAMILY Protein kinase-like (PK-like) 656 953 IPR011009 -
Glsi10g0926 983 SMART serkin_6 666 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0926 983 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Glsi10g0926 983 Gene3D Ribonuclease Inhibitor 356 470 IPR032675 -
Glsi10g0926 983 Gene3D Ribonuclease Inhibitor 28 182 IPR032675 -
Glsi10g0926 983 FunFam Leucine-rich receptor-like protein kinase family protein 186 282 - -
Glsi10g0926 983 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 759 965 - -
Glsi10g0926 983 SUPERFAMILY RNI-like 303 572 - -
Glsi10g0926 983 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 24 952 - -
Glsi10g0926 983 FunFam Leucine-rich repeat receptor-like protein kinase TDR 283 599 - -
Glsi10g0926 983 Pfam Protein kinase domain 667 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0926 983 FunFam Receptor-like protein kinase HAIKU2 649 758 - -
Glsi10g0926 983 Gene3D Transferase(Phosphotransferase) domain 1 759 961 - -
Glsi10g0926 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Glsi10g0926 983 Gene3D Ribonuclease Inhibitor 183 284 IPR032675 -
Glsi10g0926 983 Gene3D Ribonuclease Inhibitor 471 591 IPR032675 -
Glsi10g0926 983 ProSiteProfiles Protein kinase domain profile. 666 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g0926 983 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Glsi10g0926 983 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Glsi10g0926 983 Gene3D Phosphorylase Kinase; domain 1 649 758 - -
Glsi10g0926 983 SUPERFAMILY L domain-like 61 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0926 Glsi-ChrGlsi10 6013067 6016090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0926 20 968 Receptor kinase-like Gene Family AT1G09970 63.417 0.0 1205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi10g0926 Pkinase 2.1e-44 CL0016