Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0881 ATGAGTGTTGAACCCCAGAATTCTGAAACTGAGAGCTGCTCAAACTCATTCTCATCTCCACCAACTTCACCATCCTCGCCTCCTTCAACTAGGGCTCTCCAAAACTCTGTCCCACAGGCTAAAACTCTGGACTCAGAATCAAAAAAGATCAAACGCATTCGAGACTCCAACAAACACCCGGTGTATCGTGGAGTCCGTATGCGAAATTGGGGCAAATGGGTTTCTGAAATTCGCGAGCCCCGCAAGAAATCACGCATATGGCTCGGTACATTCTCCACCCCCGAAATGGCGGCGAGGGCACACGACGTTGCTGCTTTGAGTATAAAAGGTAACTCGGCCATTCTCAATTTCCCCGAACTAGCCAACTCGCTGCCTCGCCCTGTCTCACTCTCTCCTCGCGATGTCCAGGCAGCAGCTGCAAAAGCTGCTCAAATGGATCAGTTCGAATTGCCATCGTCATCCGCTTCAACGTTGTCATCATCATCTTCACTCTCGTCGTTGGCTTCGGCAATGGAAATGTCCACTGGTTCAGACGAATTGAGCGAGATTATAGAGTTGCCAAGGTTGGAAACAAGTGACGAGACGTCCGGGTTGAGGAAGGAGTTTGTGTATGTGGACTCGGATGATGGGTGGATGTATGAGCCACCATGGTTACAGAGCATGGAAGATTGCGAAGGGTATGTCGCTGATAAGCTGGCAGTGCCAGAGAGTTGGATTATAAATAGTTATGATAGTTTGCTGTGGAATTACTGA 753 0.4914 MSVEPQNSETESCSNSFSSPPTSPSSPPSTRALQNSVPQAKTLDSESKKIKRIRDSNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPELANSLPRPVSLSPRDVQAAAAKAAQMDQFELPSSSASTLSSSSSLSSLASAMEMSTGSDELSEIIELPRLETSDETSGLRKEFVYVDSDDGWMYEPPWLQSMEDCEGYVADKLAVPESWIINSYDSLLWNY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0881 250 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Glsi10g0881 250 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Glsi10g0881 250 MobiDBLite consensus disorder prediction 1 20 - -
Glsi10g0881 250 FunFam Ethylene-responsive transcription factor 2 60 119 - -
Glsi10g0881 250 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Glsi10g0881 250 MobiDBLite consensus disorder prediction 28 43 - -
Glsi10g0881 250 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Glsi10g0881 250 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Glsi10g0881 250 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Glsi10g0881 250 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Glsi10g0881 250 MobiDBLite consensus disorder prediction 1 57 - -
Glsi10g0881 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 196 - -
Glsi10g0881 250 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0881 Glsi-ChrGlsi10 5655406 5656158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0881 35 227 AP2-EREBP Transcription Factor Family AT5G11590 64.824 1.38e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi10g0881 AP2 7.5e-14 CL0081