Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0860 ATGTTATTCTGGCTTCTCGACCGGTTGGATTCTGAAGCTCAGTTCGTTGCCGGTAGCGGGAGAGTTGCATTTAAGTGGGGATTGGGGTATGCTATTTTACTTGTCTGCCAACAAACAATGGAAGGTGACAGGACAACCCCTGCTCCATCAGATGGGCTCAGTGATGGCGTTCAGAAAATTAGAGCACTGCATGGGCGGACTAGCGGCCCAACAAGGCGTTCTACAAAAGGACAGTGGACACCTGAAGAGGATGAGATTTTGCGGAAGGCTGTTCAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTTAAGGATAGAACGGATGTACAATGTCTACATAGGTGGCAGAAAGTTTTAAATCCTGAACTTGTAAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATAATTGATTTGGTGAACAAATATGGACCAAAGAAGTGGTCTACTATAGCACAACACTTACCTGGACGAATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTCAATCCTGCTATAAACAAGGAAGCATGGACGCAGGAAGAGGAGTTAGCATTAATACGTGCTCATCAGATTTATGGGAACAGATGGGCAGAATTGACAAAGTTCTTGCCGGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCTGTTAAAAAGAAATTGGATTCTTACTTGGCAGCAGGTTTGCTTACTCAGTTCCAAGATGTACCCCATGTTGGACATAATCAACCCATGGTTTCAACCTCTTCGAGGTTGCAGTGTAGTGGAGATGATAATGGTCAAAAAGGAACAGAAGGAGAGGAAGTTTCAGAGTGTAGCCAAGAGTCAGCTCATGGTAGTCGCCTTCCATCTGCCAGAGAGATGACCAATGTTGTTGTACATACTACAGAGGAATTGAAGCCAAACAATGATTCTAGTCTAGGAAACGTGCACAGTCCTAGTCAAGCATCCTGTTCAGAGCCATATTACATATCTTTGGATGATGTTACTGTATCCATCCCAGACATAGCTCGCGAAGAGGCATCCTCTTCTCAATTTATTGAGCAAAAATACTTACATGAGCCTAGAAATTGTGCAAGCAGGGATCATCAGTTTAATTTACATGCTTTACCCAATATTTCATCTTTAGACTTGGGTCAGGAATCCTCACTTTTGCAAAGAGATTGTATAGTTTCTGATGTAAGCCATGACATTGTGAATGTTCCATTTCATACTTCAGAGGGGTTATGTATTTCAACATCTATGGGACCCACATCTATGGATTCTGCTAAATCAGAGCACATCTTGATTTCTGATGAAGAATGTTGTAGAGTCCTATTTTCAGAGGCAATGAATGACGGTTGCTTTTCCTCCGGAGATTATAACAAAGGTATTGATATGGTTTTTTCCGGATGTTCTTCATTTCTTTGCCAATCATCTGACATCCAGCTATGTGAAGCCGGTGGAACCTCAGCTGCATTCCTAATTTGTCCATCAAGATCTAATAATTTAATGGGATCTTCATGCTCCCAATCTTTTCCAACTGTTCCTTCAGTACTTTCTGCTAATGATGGTAGACTAGAGTATGCTGAAGCCAATCAAATATTTGAAGCTGATGATCAGCAGTTTGTCTCCAGAGCACATGATAGCTTCATTTATGCTAACGAATCATCCATTTCTCCTTGTGTCGATGCTATAGATAGCGCAGACATGCTCGAACCACTAGATATTGTGAAGGATGCTTCAAGATTGGTCCCTTTAAATACTTTTGGCTGTGAATCAGATACCAATCAAACTTGTTATCCAATGGATGAAAAGACTGATGTCCATACAGAACAGGACACAGGATCTCTGTGTTATGAACCTCCTCGATTTCCAAGCTTGGATATTCCTTTCTTCAGCTGTGATCTTATACAATCTGGAGGGGATATGCAGCAAGAATTTAGTCCGCTGGGTATCCGCCGGCTTATGATGTCTTCTATGAACTGTCCAACTCCCCTGAGATTATGGGACTCGCCTTCTCGTGATGATAGTCCAGATGCTTTGTTGAAAAGTGCTGCTAAAACTTTCACGGGCACACCATCCATATTAAAGAAACGACACCGAGACTTGATATCACCTCTATCAGATAAGAGAATCGACAAGAAACTTGAGACTGATATGACAACCAAATTGACTACACATTTTTCACGTTTGGATGTCATGTTTGATGACAATGATACTCGGAAAGCAGATATGCTTCCTTCATCTTCAATGCAGAAAAAGAAATCTGGAGCCTCTGTTGACGACAAAGAAAATTGTGGACAAGTTTTGGAAGGGGAACAAGTAGAGGGAAAAAATGAATCTACAATTTTGAGCTACAGACAGTTAGAAAAAGATACTGGTGCTAATAATTCCCAGGATATCCAGCCACCTCTGGATGTTGATTCTAAGATGAAGGTTGATATTGACGCTGATGCTGCCGCAGAGATTGTGCAACAATCTTCTGGTGTCTTAATTGAACATGATATGAATGACTTGTTATTGTATTCTCCTAATCAAATCGGTTTTAAATCAGACAAAACTCACAGTTCAAGTGCTGGAACTCCCAGAAACCTCGACAATCGAAGCTTGGAAGGAGCTCCAAATCAGAGCATTCATTCGAAACCATTTTCTGAAAAACCCTGCTCAAGAGATAGCTCCCCTTCTGTTCGGGTAAAGGAAAATGAAATTCCTTCAGTAGCTGTTACTAGTGTACAATCTGTTTGTTCAGCAGGCCCTGGGGAGAATTCTGGTGATCATACTGGAAATGATGCTGGTTCTGAAACATTTAACATATTTGGCGGAACACCTTTTAGAAGAAGCATCGAATCCCCTTCAGCATGGAAGTCTCCTTGGTTCTTTAATACTTTTCTGCCTAGCCCCAGAATCGATACTGAAATAACAATTGAGGATTTTGGGTATTTCATGAGCCCAGGCGATAGAAGCTATGATGCAATTGGGTTGATGAAACAGATCAAGGAACAAACTGCTGCTGCATATGCCAATGCTCAGGAGATTTTGGAAAATGAAACTCCCAAGGCCAAAGATGCATCCGAAAACGCCAGGGATGTGGACCAGGTAAACAAAGATGCTCATAACCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTGATGGAGCGACGCATACTTGACTTCAGTGAATGTGGAACACCAGGGAAGGGGGATAACAGCAAACCCTCAGCTATGACCTTCTCAAGCCCTTCTTCATATTTGTTGAAGGGGTGTAGATAG 3282 0.4177 MLFWLLDRLDSEAQFVAGSGRVAFKWGLGYAILLVCQQTMEGDRTTPAPSDGLSDGVQKIRALHGRTSGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLAAGLLTQFQDVPHVGHNQPMVSTSSRLQCSGDDNGQKGTEGEEVSECSQESAHGSRLPSAREMTNVVVHTTEELKPNNDSSLGNVHSPSQASCSEPYYISLDDVTVSIPDIAREEASSSQFIEQKYLHEPRNCASRDHQFNLHALPNISSLDLGQESSLLQRDCIVSDVSHDIVNVPFHTSEGLCISTSMGPTSMDSAKSEHILISDEECCRVLFSEAMNDGCFSSGDYNKGIDMVFSGCSSFLCQSSDIQLCEAGGTSAAFLICPSRSNNLMGSSCSQSFPTVPSVLSANDGRLEYAEANQIFEADDQQFVSRAHDSFIYANESSISPCVDAIDSADMLEPLDIVKDASRLVPLNTFGCESDTNQTCYPMDEKTDVHTEQDTGSLCYEPPRFPSLDIPFFSCDLIQSGGDMQQEFSPLGIRRLMMSSMNCPTPLRLWDSPSRDDSPDALLKSAAKTFTGTPSILKKRHRDLISPLSDKRIDKKLETDMTTKLTTHFSRLDVMFDDNDTRKADMLPSSSMQKKKSGASVDDKENCGQVLEGEQVEGKNESTILSYRQLEKDTGANNSQDIQPPLDVDSKMKVDIDADAAAEIVQQSSGVLIEHDMNDLLLYSPNQIGFKSDKTHSSSAGTPRNLDNRSLEGAPNQSIHSKPFSEKPCSRDSSPSVRVKENEIPSVAVTSVQSVCSAGPGENSGDHTGNDAGSETFNIFGGTPFRRSIESPSAWKSPWFFNTFLPSPRIDTEITIEDFGYFMSPGDRSYDAIGLMKQIKEQTAAAYANAQEILENETPKAKDASENARDVDQVNKDAHNQPGNHSQLASNALMERRILDFSECGTPGKGDNSKPSAMTFSSPSSYLLKGCR 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0860 1093 ProSiteProfiles Myb-like domain profile. 175 225 IPR001005 -
Glsi10g0860 1093 MobiDBLite consensus disorder prediction 248 268 - -
Glsi10g0860 1093 PANTHER MYB PROTEIN-RELATED 76 149 - -
Glsi10g0860 1093 MobiDBLite consensus disorder prediction 916 935 - -
Glsi10g0860 1093 Gene3D - 128 179 - -
Glsi10g0860 1093 MobiDBLite consensus disorder prediction 1062 1093 - -
Glsi10g0860 1093 Gene3D - 75 127 - -
Glsi10g0860 1093 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 179 229 IPR017930 -
Glsi10g0860 1093 Pfam Myb-like DNA-binding domain 128 174 IPR001005 -
Glsi10g0860 1093 Pfam Myb-like DNA-binding domain 180 222 IPR001005 -
Glsi10g0860 1093 Pfam Myb-like DNA-binding domain 76 122 IPR001005 -
Glsi10g0860 1093 SUPERFAMILY Homeodomain-like 74 136 IPR009057 -
Glsi10g0860 1093 Gene3D - 181 236 - -
Glsi10g0860 1093 ProSiteProfiles Myb-like domain profile. 71 122 IPR001005 -
Glsi10g0860 1093 MobiDBLite consensus disorder prediction 853 893 - -
Glsi10g0860 1093 CDD SANT 182 222 IPR001005 -
Glsi10g0860 1093 MobiDBLite consensus disorder prediction 853 904 - -
Glsi10g0860 1093 FunFam Transcriptional activator Myb isoform A 75 127 - -
Glsi10g0860 1093 SUPERFAMILY Homeodomain-like 125 221 IPR009057 -
Glsi10g0860 1093 FunFam Transcriptional activator Myb isoform A 128 180 - -
Glsi10g0860 1093 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 122 IPR017930 -
Glsi10g0860 1093 MobiDBLite consensus disorder prediction 1073 1087 - -
Glsi10g0860 1093 CDD SANT 79 122 IPR001005 -
Glsi10g0860 1093 ProSiteProfiles Myb-like domain profile. 123 174 IPR001005 -
Glsi10g0860 1093 MobiDBLite consensus disorder prediction 248 294 - -
Glsi10g0860 1093 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 178 IPR017930 -
Glsi10g0860 1093 FunFam Transcription factor MYB3R-2 181 243 - -
Glsi10g0860 1093 CDD SANT 130 174 IPR001005 -
Glsi10g0860 1093 MobiDBLite consensus disorder prediction 745 767 - -
Glsi10g0860 1093 SMART sant 127 176 IPR001005 -
Glsi10g0860 1093 SMART sant 75 124 IPR001005 -
Glsi10g0860 1093 SMART sant 179 227 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0860 Glsi-ChrGlsi10 5515693 5522955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0860 44 1093 MYB Transcription Factor Family AT4G32730 44.737 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi10g0860 Myb_DNA-binding 3.2e-15 CL0123