Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0836 ATGGAGTCCAAACCGACCGGTGTCATGACTGAATGCCCTGAAACTCAATCTTTTGCTGCGTCCTCGATTTTCTCCGTCGTGGGAGGTGGCGACTTTGCTCGGATCCTGTCTGTGTCGGATTTCGAAGAGTATGTGAATAAGGCGGTGATCGCAACCGGCGTAGCCAAACGAGGCGAGTTCAGGTGTGACAGAGACAAAGGTTTCTCTGAGATGGATGCATTTTTTGGCGTCGATGACTTCAACGCCGATTTTCGAAACCCGGTTAGTGCTCTCTCTCAACTTAAGGATCGCTCACAGTATCAGGAAGCACGTTTGGAGCCGTCTTCTGCCACGTCATCAAGCGATACCATTCCCTGGTCCCAAAACGTCACTCCCAAGCATCCTGCCATCTCTGCTACCATTGAATCTCAGTCATCAATTTGTGATGCTGGTAATGCTATGGTTGGCAGCCCAGTGTCAGCTAATAAACCGAACGCAAGAGATAATCAAGCAAAAGGGGGTTCAAGTGGATCCTCACACGAGCAGTCCGATGAGGATGATGAAGCAGGTCCTTGTGAACAGAGCATAGATCCCGATAATAAGCAGGATAGAAGGAAGAAATCTAATCGGGAGTCTGCAAGGAGATCAAGAAGAAGAAGACAAGCGCATTTGGCTGACCTTGAGGTGCAGGTTGAACAACTAAGAGTGGAAAATGCAACCCTATTCAAGCAGCTTAATGATGCCGGTCAACAATTTCGTGAGGCTGACACTAATAATCGTGTGCTAAGATCAGATGTCGAAGCCTTGAGAGCTAAGGTGAAGTTAGCTGAAGATATCGTTGCTCGCGGCTCCTTAACCACCTTGAACAATCAGCTTCTTCAGACTCAGAGTCACCTAAGCACACCACCACAGCTTAACACTACTAGTCTGCGCCGCATGGCACATGTCTCGCCAACCATCACTATCCGTGGAAATGATGCCTCATATGCTGGTATGACAGTTGGTGGACAAAATTCAACTCTGGGACTTGGAAACTTAGATATTACTAATAGCAGTTTCAACACTGGAGTCATAAGTGATGCTGTGAGCTGCGTGACTGATAGTATATGGGCGTAA 1095 0.4767 MESKPTGVMTECPETQSFAASSIFSVVGGGDFARILSVSDFEEYVNKAVIATGVAKRGEFRCDRDKGFSEMDAFFGVDDFNADFRNPVSALSQLKDRSQYQEARLEPSSATSSSDTIPWSQNVTPKHPAISATIESQSSICDAGNAMVGSPVSANKPNARDNQAKGGSSGSSHEQSDEDDEAGPCEQSIDPDNKQDRRKKSNRESARRSRRRRQAHLADLEVQVEQLRVENATLFKQLNDAGQQFREADTNNRVLRSDVEALRAKVKLAEDIVARGSLTTLNNQLLQTQSHLSTPPQLNTTSLRRMAHVSPTITIRGNDASYAGMTVGGQNSTLGLGNLDITNSSFNTGVISDAVSCVTDSIWA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0836 364 FunFam BZIP transcription factor 192 243 - -
Glsi10g0836 364 MobiDBLite consensus disorder prediction 103 124 - -
Glsi10g0836 364 Pfam bZIP transcription factor 194 240 IPR004827 GO:0003700|GO:0006355
Glsi10g0836 364 Gene3D - 193 250 - -
Glsi10g0836 364 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 197 212 IPR004827 GO:0003700|GO:0006355
Glsi10g0836 364 MobiDBLite consensus disorder prediction 151 171 - -
Glsi10g0836 364 SUPERFAMILY Leucine zipper domain 194 243 IPR046347 GO:0003700|GO:0006355
Glsi10g0836 364 Coils Coil 210 244 - -
Glsi10g0836 364 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 255 IPR004827 GO:0003700|GO:0006355
Glsi10g0836 364 PANTHER BASIC LEUCINE ZIPPER 63 112 340 - -
Glsi10g0836 364 SMART brlzneu 190 254 IPR004827 GO:0003700|GO:0006355
Glsi10g0836 364 MobiDBLite consensus disorder prediction 145 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0836 Glsi-ChrGlsi10 5336814 5339885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0836 115 363 bZIP Transcription Factor Family AT5G24800 53.360 1.88e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g0836 bZIP_1 9.2e-11 CL0018