Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0835 ATGAGCCGCATATTTTCTGTTCTGTTTCTTAATTTGGTGATACTCAAGAGAGTGGTAATCATTTATCCCTTAACCTCTTCACTCATCAGTATTCATTGGATCAGTATTATCATCAAACACTGTTTCCTCTCTGCCGCCATAATGGGGCTCTATGATCCCAATCGATCTAGTGTCGCTTCTAATATCCATTCCCACTCCCCCCTTTCGGTCTCTGCTGTTGGTGATGATATCAGAAATGCTGTTGATATGAAGCGCCTTAGAAGGATGATTTCTAGAAGGGAGTCTGCCAGGCGATGTAGAAGAAGAAAAGAAAGGCATTTGGCTAACCTTGAGTCGCAGGTTGAACAACAGAGAAAGGAAAATGCAGCGCTATCCCAGCAGCTTACATATGCTACTCAACGATATCGTGAGGCCGAGACCAATTGTCAAGTGCTAAATGTCCTATATTTAAGAGCAAAGGAACAGCTTGAGAATGAAATGGCAAGAAGCAGGAGAGTTGGAGAAGAGCATGAGGAGGTTGAGATAGTGCAGGGCGGAGAAGAGTGGTACCGTTACCGTCAAAACAAAGAGGTGTTAGAAGAGAAAGGGTTGCGGAGAGGAGTTGTTGGGACACATGAGTTGGTGGAGAGTAGTAGGGTTCAAGAGACTGAATTTGTGTGGATGAAACACAAGGCCCCTCCGAGGTATATCGAAGATGAAGCAAGGGATTGCACGGGTGGCAGTGATTCATGA 732 0.4495 MSRIFSVLFLNLVILKRVVIIYPLTSSLISIHWISIIIKHCFLSAAIMGLYDPNRSSVASNIHSHSPLSVSAVGDDIRNAVDMKRLRRMISRRESARRCRRRKERHLANLESQVEQQRKENAALSQQLTYATQRYREAETNCQVLNVLYLRAKEQLENEMARSRRVGEEHEEVEIVQGGEEWYRYRQNKEVLEEKGLRRGVVGTHELVESSRVQETEFVWMKHKAPPRYIEDEARDCTGGSDS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0835 243 Pfam bZIP transcription factor 83 129 IPR004827 GO:0003700|GO:0006355
Glsi10g0835 243 SUPERFAMILY Leucine zipper domain 83 135 IPR046347 GO:0003700|GO:0006355
Glsi10g0835 243 Coils Coil 153 173 - -
Glsi10g0835 243 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 128 IPR004827 GO:0003700|GO:0006355
Glsi10g0835 243 Coils Coil 93 134 - -
Glsi10g0835 243 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Glsi10g0835 243 Gene3D - 83 139 - -
Glsi10g0835 243 PANTHER BASIC LEUCINE ZIPPER 63 80 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0835 Glsi-ChrGlsi10 5331194 5334169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0835 82 160 bZIP Transcription Factor Family AT5G24800 48.148 7.19e-16 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi10g0835 bZIP_1 1.3e-08 CL0018