Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0831 ATGTCCATGGATCCAAAGAAATCTAACAAGATCAGAGAAATTGTTAGGCTTCAACAGATCCTTAAGAAATGGAGAAGGGTGGCCAACTCTTCAAAAACCAGCAGTAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGTAAAAGCATCAAGTTTTTGAAAAGGACACTTTCTTTATCTGAACGTGAAGGAGGATCAACCAATGTTGTTCCCAAAGGATACCTAGCTGTTTGTGTTGGGGAAGAGCTTAAGAGGTTCATTATACCGACAGAGTATTTGGGTCATAAGGCCTTCCACATGTTACTCAGAGAAGCAGAAGAAGAATTTGGGTTTCAACAGACAGGTGTTCTGAGGATTCCCTGTGAAGTGTCTGTGTTTGAGAGTATTTTGAAGATGGTGGAGGGCAAAAAGGACAAGTTTTCCACTCAAGAATGTAGACTTAGCGTTGAAGAGATGGTGGGATACTGCTCATCCGAAAACCAGCTTTCCTATTCTCAGCATCCTCAGAGTCCAATGTGCAGATAG 528 0.4299 MSMDPKKSNKIREIVRLQQILKKWRRVANSSKTSSSNSNSNSSSSSSSKSIKFLKRTLSLSEREGGSTNVVPKGYLAVCVGEELKRFIIPTEYLGHKAFHMLLREAEEEFGFQQTGVLRIPCEVSVFESILKMVEGKKDKFSTQECRLSVEEMVGYCSSENQLSYSQHPQSPMCR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0831 175 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 130 IPR003676 GO:0009733
Glsi10g0831 175 Pfam Auxin responsive protein 22 134 IPR003676 GO:0009733
Glsi10g0831 175 MobiDBLite consensus disorder prediction 25 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0831 Glsi-ChrGlsi10 5315921 5316448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0831 3 175 Calmodulin-binding Proteins AT2G24400 54.974 5.57e-62 187